Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq24 152 7e-32
seq112 91.5 2e-13
>seq24
Length=306188
Score = 152 bits (168), Expect = 7e-32
Identities = 340/503 (68%), Gaps = 18/503 (4%)
Strand=Plus/Minus
Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192
||||| || || | ||| ||||| | | | || || || ||||| || ||||| || | |
Sbjct 133511 TGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACG 133452
Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252
|||| ||| ||||| || | || | | ||| ||||| | ||||||||| | || |||
Sbjct 133451 TATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTG 133392
Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCC 72310
|| |||| || || || ||||||| || ||| |||| |||| || || |
Sbjct 133391 GTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTC 133334
Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370
||||||| || ||||| | || || || | || || ||||| || || || || |
Sbjct 133333 CTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGT 133274
Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430
| ||| |||||| || || || ||| ||||| || | || || |||||||| |
Sbjct 133273 CTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGA 133214
Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA- 72489
| | ||| || |||||||| || ||| || |||| || ||||| ||||| |
Sbjct 133213 ACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGA 133154
Query 72490 ---GCT-GAT-TCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCT 72544
||| ||| || | |||| |||| || || ||||||||||| | ||| ||||
Sbjct 133153 CACGCTCGATGTCGTCACCCCA--GATG----CCGACAGCGACACGCATGATCATGTGCT 133100
Query 72545 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 72604
|||||| ||||| |||||| || || |||| | ||||||| || | ||| || |
Sbjct 133099 GAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGA 133040
Query 72605 AACCAAAATAGTTGTA--TGAAA 72625
| || || || | ||| |||||
Sbjct 133039 AGCCGAAGTATTGGTAGTTGAAA 133017
>seq112
Length=604763
Score = 91.5 bits (100), Expect = 2e-13
Identities = 147/211 (70%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123
||| ||||| ||| |||||| |||||||| | | ||| | |||||||| || || |
Sbjct 339670 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 339611
Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183
|| ||||| || |||||||| || ||||| || || ||||| || | ||| |||||
Sbjct 339610 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 339551
Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTCATG 42240
|| || || || || || || |||| || | || || || | | ||| ||
Sbjct 339550 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 339491
Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 42271
|||||| |||||||||||||||||||
Sbjct 339490 GATCCACCGAATAGCCCAATCGGCCTTCTTT 339460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671133520484520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |