Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq126 107 3e-19
seq182 98.7 2e-16
>seq126
Length=81464
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 26226 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 26284
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| | ||||
Sbjct 26285 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 26325
Score = 84.2 bits (92), Expect = 3e-12
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| || | |||| | |||| ||||||| || || |||| |||||
Sbjct 26381 TGATCTACGAGGAGACCCGCGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATG 26440
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| |||||||| | || | ||||| |
Sbjct 26441 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTTGTCTACG 26500
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||||| | | || ||||| || |||||
Sbjct 26501 CTCTCAAGCGACAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 26544
>seq182
Length=59117
Score = 98.7 bits (108), Expect = 2e-16
Identities = 84/101 (83%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| |||||
Sbjct 54142 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGCATCACCAAGCCCGCTAT 54200
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|| ||||| ||||||||||| || ||||||||| | ||||
Sbjct 54201 TCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATTTCTG 54241
Score = 95.1 bits (104), Expect = 2e-15
Identities = 124/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| |||||| ||||||| || || |||| || |
Sbjct 54300 TGATCTACGAGGAGACCCGTGGTGTTCTGAAGACCTTCCTCGAGGGAGTCATCCGCGACG 54359
Query 16596 CT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654
|| || || || ||||||||||| || || ||||| ||||| ||| | ||| |||||||
Sbjct 54360 CTGTTACA-TACACCGAGCACGCCAAGCGAAAGACCGTCACATCCCTCGATGTCGTCTAC 54418
Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703
|| | || || |||||||| | | || || || || ||||| |||
Sbjct 54419 GCCCTCAAGCGACAAGGCCGCACCCTGTACGGATTCGGTGGTTAAACTT 54467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074581014161
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |