Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq112 104 2e-17 >seq112 Length=604763 Score = 104 bits (114), Expect = 2e-17 Identities = 246/364 (68%), Gaps = 11/364 (3%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| |||| || ||||| | Sbjct 339958 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 339899 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACA- 119760 ||| || ||||| || || |||| ||| || ||| |||| ||| || | |||| | Sbjct 339898 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTGCC-AAGTGCCACAAGAA 339840 Query 119761 GTCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAG 119820 | || || || |||||||||||||||| |||| | ||| |||||||||| | || Sbjct 339839 GACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAG 339780 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATAC 119880 || || | || | ||| | ||| |||| || |||| ||| || || | || | Sbjct 339779 CGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGAT-C 339721 Query 119881 TCAACACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAGAC 119940 ||| | || ||| | ||| | || ||| || | | ||||| |||| Sbjct 339720 TCACGA--ATGATCT--GCTTGCTGGCTCGGTTCTTCAAGTGA--GAGTGTAG--GAGAC 339669 Query 119941 AAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGC 120000 | || ||||||||||| || || || || | |||||||| |||||| | | ||||||| Sbjct 339668 AGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGC 339609 Query 120001 CGGG 120004 | || Sbjct 339608 CAGG 339605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478658349319440