Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq112 104 2e-17
>seq112
Length=604763
Score = 104 bits (114), Expect = 2e-17
Identities = 246/364 (68%), Gaps = 11/364 (3%)
Strand=Plus/Minus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || ||||| || || || || || |||||||| |||| || ||||| |
Sbjct 339958 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 339899
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACA- 119760
||| || ||||| || || |||| ||| || ||| |||| ||| || | |||| |
Sbjct 339898 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTGCC-AAGTGCCACAAGAA 339840
Query 119761 GTCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAG 119820
| || || || |||||||||||||||| |||| | ||| |||||||||| | ||
Sbjct 339839 GACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAG 339780
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATAC 119880
|| || | || | ||| | ||| |||| || |||| ||| || || | || |
Sbjct 339779 CGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGAT-C 339721
Query 119881 TCAACACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAGAC 119940
||| | || ||| | ||| | || ||| || | | ||||| ||||
Sbjct 339720 TCACGA--ATGATCT--GCTTGCTGGCTCGGTTCTTCAAGTGA--GAGTGTAG--GAGAC 339669
Query 119941 AAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGC 120000
| || ||||||||||| || || || || | |||||||| |||||| | | |||||||
Sbjct 339668 AGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGC 339609
Query 120001 CGGG 120004
| ||
Sbjct 339608 CAGG 339605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478658349319440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |