Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq24 156 5e-33
seq112 95.1 2e-14
>seq24
Length=306188
Score = 156 bits (172), Expect = 5e-33
Identities = 438/665 (66%), Gaps = 18/665 (3%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || |||| || ||||| | | ||| || |||| | || || || |||
Sbjct 133673 AGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTC 133614
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| || ||||| || ||||| || || | || | || | | | ||| || ||
Sbjct 133613 ATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTG 133554
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| ||||| | ||| | | || || | ||||| || || | |||
Sbjct 133553 CCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAA 133494
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | | || || || ||||| || ||||| || | ||||| ||| ||||| ||
Sbjct 133493 ATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTG 133434
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | | ||| ||||| | ||||||||| || || ||||| || | || ||
Sbjct 133433 AAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAG 133374
Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| ||||||| || | | |||| |||| || || |||||||| || ||||| |
Sbjct 133373 CCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTCCTGCCATCTTGGAGATCA 133316
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | || || ||||| || || || || || ||| |||||| || |
Sbjct 133315 TGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCA 133256
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
| || ||| ||||| || | || || |||||||| || | ||| || |||||||
Sbjct 133255 GGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGT 133196
Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCT-GA-GTCTATAT 63551
|||| ||| || || | || ||||| ||||| | ||| || ||| |
Sbjct 133195 GAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCAC 133136
Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611
|||| |||| || || ||||||||||| | |||||||||||||| ||||| ||||
Sbjct 133135 CCCA--GATG----CCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCT 133082
Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669
|| | || |||| | ||||||| || | ||| || || || || || | |||
Sbjct 133081 TGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGT 133022
Query 63670 TGAAA 63674
|||||
Sbjct 133021 TGAAA 133017
>seq112
Length=604763
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/211 (70%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719
||| ||||| ||| ||| || ||||| || | | ||| | |||||||| || || |
Sbjct 339670 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 339611
Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779
|| ||||| || |||||||| || ||||| || |||||||| || | ||| |||||
Sbjct 339610 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 339551
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATG 32836
||| || || || || || || |||| || | || || || | | | ||| ||
Sbjct 339550 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 339491
Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 32867
|||||| |||||||||||||||||||
Sbjct 339490 GATCCACCGAATAGCCCAATCGGCCTTCTTT 339460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633626637889200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |