Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq112 84.2 2e-11 >seq112 Length=604763 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || |||||||| || | || || || || || || | ||| ||| |||||| || Sbjct 339669 CAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAG 339610 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||||||||| || || || || ||| |||| || || Sbjct 339609 CCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAAA 339550 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT- 93270 ||||| || ||||| || || || || | ||| | ||||||| || | || | || Sbjct 339549 ATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTT-GTCCTG 339491 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 |||||| | |||||||||||| || || Sbjct 339490 GATCCACCGAATAGCCCAATCGGCCTTCTT 339461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856087565480