Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq388 170 4e-37
seq284 149 1e-30
seq663 134 3e-26
seq342 129 1e-24
seq58 93.3 8e-14
seq312 84.2 4e-11
>seq388
Length=11445
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || ||| ||| || |||||||| || |||
Sbjct 9231 CCACCACGGAGGCGGAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 9290
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| |||||||| || |||| |||||||| || |||
Sbjct 9291 AGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCCGGGGGA 9350
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| ||||| ||||| | || || ||
Sbjct 9351 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 9410
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 9411 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 9457
>seq284
Length=28030
Score = 149 bits (164), Expect = 1e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | || | ||| || || || || ||||||||||| || ||||||
Sbjct 19468 CCACCGCGAAGACGGAGGACGAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAG 19409
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | ||||||||||| ||
Sbjct 19408 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGG 19349
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||| || |||||||| || | || || ||
Sbjct 19348 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGACC 19289
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||||||| || || ||||||||||||||||
Sbjct 19288 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 19252
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| ||| || || ||||| || || ||||| |||||
Sbjct 19924 CCGCCACGGAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACTC 19865
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || |||| || ||||| || ||
Sbjct 19864 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGGG 19805
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||||||||| | |||||| ||||| || || | ||||| ||
Sbjct 19804 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGATTCGACC 19745
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || || ||||||||||||||||| ||||||||
Sbjct 19744 TCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 19698
Score = 132 bits (146), Expect = 9e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || ||||| | || | ||| || |||||||| || |||||||| || ||||||
Sbjct 19184 CCTCCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 19125
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | || || || || ||
Sbjct 19124 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATAAGGCGCTGCTGATCCGGAGGG 19065
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| ||| ||||||||||| | || || ||
Sbjct 19064 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTCCGAGGACTCGACC 19005
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | |||||||| ||||||||
Sbjct 19004 TCAAGAGTGATGGTCTTTCCCGT 18982
>seq663
Length=163754
Score = 134 bits (148), Expect = 3e-26
Identities = 445/677 (66%), Gaps = 39/677 (6%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | ||| || ||||||||||||| || |||||| ||||||
Sbjct 14481 CGCCACTGGATGTACTCGGAGGGAGTGCTGTCCAGGTGGTTATCGATATGGGCGAAAGCG 14540
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099
||||| | ||| || || || ||||| |||| | | ||| | || ||
Sbjct 14541 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGGGTAGGG 14600
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| ||||||||||| ||||| || || | ||| || ||||| |||||||||||
Sbjct 14601 ATGAG-CTCACCGGTGAGGACGTTGATCAGAGTGGACTTTCCGGCACCGTTGGGGCCAAT 14659
Query 225160 CACGCCAATCCGGGA--TGACATTGCAACCTGCGAGTTCACGTTG-----CTGAAGATCT 225212
||| |||| ||||| || ||| ||| || | || | |||| | |
Sbjct 14660 GACGGCAATACGGGAGCCGAGCGAGCA--CTGGAAGGAGATGTCGGCAATCTGAGGCTTG 14717
Query 225213 CAGG-GCCAGTTTGGTAAGCAAAGGCCACGC------CACGCAGCTTCATGATGGCACGG 225265
||| |||| |||| |||| || || ||||||| || || |
Sbjct 14718 GAGGTACCAG---GGTACTGGAAGGACATGCGGGTGGCACGCAG------AATAGCCTTG 14768
Query 225266 TCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCG 225325
|||||| | | |||||| ||||| |||||||||||||| ||| || | | |
Sbjct 14769 GCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGCTGAACTCCATCTCGGAG 14828
Query 225326 TCCTTCAGGTCGTAGTAAGATGCAGC-CTCGGGTCGCTTTGCCACGAAAGCAGACAGGTT 225384
| || |||||||||||| ||| ||| | | || || || || ||||||
Sbjct 14829 GCGCCGAGCTCGTAGTAAGATCGAGCAGATGGGACACGCTG-GACAAAGGCCTTCAGGTT 14887
Query 225385 TCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTG 225443
|| || | ||||||||| | |||||| ||||| || ||| | ||| ||
Sbjct 14888 ACCCCTGTAACGCTTGAGCTTGAAG---CGCTCGTAGTGAACGATGTGCTG-GCAGACGT 14943
Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTG 225502
||| |||||| |||||||||||| || ||||| || | || | | | | || |
Sbjct 14944 TGTCGAGGAAGGTAGAGTCGTGGGAGACGATGATAGAGGTGCAAG---GGGA-GTTCTGG 14999
Query 225503 AGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562
|||| | |||||| ||||| | || |||| ||||| ||||| ||||| |||
Sbjct 15000 AGGTACTCCTCGAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGA 15059
Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622
||||| || || | | | || || ||| || |||| ||||||||| ||||||||
Sbjct 15060 AGCAGAATATCGGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAGCCA 15119
Query 225623 CCGGACAGGGAGCCGAT 225639
|| || |||| || |||
Sbjct 15120 CCAGAAAGGGCGCTGAT 15136
Score = 95.1 bits (104), Expect = 2e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225818 GGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCG 225877
||||| ||||| | ||| | || || ||||| | ||||| |||||| | |||
Sbjct 15318 GGGAAACCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGGGTTGACTTGCCAGAACCG 15377
Query 225878 TTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGG 225937
||||| ||| || |||||| | | || ||||||| | ||| | || ||| |||
Sbjct 15378 TTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGGCGGAGATGGGTCTGGTTGAGG 15437
Query 225938 AGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTCG 225997
|| |||||| |||| ||||| |||||||| || | ||| |||||||||||||||||
Sbjct 15438 AGAATCTTGGCACCGTAGGCGAGGGAGAAAGTACAGTTGCAAAGGTCCTCACCCTCCTCA 15497
Query 225998 GTCTCCTTTGCCTTGTC 226014
|||| |||||||
Sbjct 15498 TCGTCCTCCTCCTTGTC 15514
>seq342
Length=17698
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | ||||| || | |||||| |||||||| ||
Sbjct 14464 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATC 14405
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || || || || || ||||| || ||||| || || ||||| | |||||| ||
Sbjct 14404 AATCGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCA 14345
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || |||||||||||||| |||||
Sbjct 14344 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 14286
>seq58
Length=109527
Score = 93.3 bits (102), Expect = 8e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGAC--GACACGTTCGTCAGGCCCTTG 225502
||| | ||||||||||||||| || || || | ||| | | || | | ||||
Sbjct 19617 GTCCAAGAAGCCAGAGTCGTGAGAGACGATCA--GACTGGTGATGTCGGGGTGCGTCTTG 19674
Query 225503 AGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562
|||| || ||||| || | |||| |||| || | ||||| ||||||||||||||
Sbjct 19675 AGGTAGGTTTCCAGCCAGGCGATGTTGGTGACATCAAGATGGTTAGTAGGTTCGTCCAGG 19734
Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622
|| || | |||||| ||| ||||| || | ||||| |||||||| ||||| ||
Sbjct 19735 AGGAGAACGTCAGCGCGCTGGAGCATGGCTCGGGCGAGAGCAAGCTTCATCTTCCAACCA 19794
Query 225623 CCGGACAGGGAGCC 225636
|| |||||||||||
Sbjct 19795 CCCGACAGGGAGCC 19808
>seq312
Length=228657
Score = 84.2 bits (92), Expect = 4e-11
Identities = 217/328 (66%), Gaps = 6/328 (2%)
Strand=Plus/Plus
Query 173117 CACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCGCTGGCATTTACCATG 173176
|| ||||| || ||| |||| |||||| ||||| |||||| | || |||
Sbjct 225174 CATTTTGCCGCCCAGTCCCACGTGGACCTGAGCTTCGGCAACTCGTACGGCTTCACCCAC 225233
Query 173177 AACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAG 173236
| ||||||||| || || |||||||| |||||| | |||| | | | || || |
Sbjct 225234 ACCAACGTCTATGGAACTCACGTTCTTCTGGAAAGTGCGAAGA---AGGTGGGAGTTAAA 225290
Query 173237 CGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGCAGTCTGGGCAAAAAAGAA 173296
|| || || | | || || ||||| |||||||| |||| | | |||| | | ||
Sbjct 225291 CGATTTATGCACATTTCCACAGACGAGGTATACGGTGAGATCCATGCGGGCCATGACGAT 225350
Query 173297 GGCCTCGATGAACACTCGTCCCTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGT 173356
| ||||| | | | ||| | | || || |||||||| || || |||||| | |
Sbjct 225351 GTGCTCGA--ATCCAGCATCCTT-GCCCCGACCAACCCATACGCTGCGAGCAAGGCGGCT 225407
Query 173357 GCCGAAATGATGGCACGTGCATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGC 173416
||||| ||| | | | | || || | | |||||| || ||||| || ||
Sbjct 225408 GCCGAGATGCTAGTTCAGTCTTACCAGAAGAGCTTCAAGCTCCCCGTCATTGTTGTACGG 225467
Query 173417 GGCAACAATGTGTATGGCCCGCATCAGT 173444
|||||||||| || |||||||||||||
Sbjct 225468 AGCAACAATGTCTACGGCCCGCATCAGT 225495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921614600770440
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