Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq112 120 7e-22 >seq112 Length=604763 Score = 120 bits (132), Expect = 7e-22 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | ||| |||| ||| | ||| || | || ||| Sbjct 339722 ATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCTTGCGCT 339781 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | ||||||||||| || |||||| || |||||||| || || |||||||| || Sbjct 339782 CTTCTGGGCATGAACTCGGACCTCATGAAGCAATACATCGAGTTTGTTGCCGACCGTCTT 339841 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || ||||| | ||||| | ||||| || |||||||| | ||| |||||| Sbjct 339842 CTTGTGGCACTTGGCAACGAGAAGATTTACAAGTCTGCCAACCCCTTCGACTTCATGGAG 339901 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || ||| || || || ||||||||||| |||||||| ||||||| || Sbjct 339902 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTACCAGAAG 339961 Query 243742 CCTGGTGTGATGAA 243755 ||||| | ||||| Sbjct 339962 GCTGGTATCATGAA 339975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102870433549950