Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq24 214 2e-50 seq112 86.0 7e-12 >seq24 Length=306188 Score = 214 bits (236), Expect = 2e-50 Identities = 1131/1786 (63%), Gaps = 55/1786 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| || |||||||| | | ||||| || Sbjct 134819 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 134760 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | ||| || || |||| || ||| | || || |||||||||||| Sbjct 134759 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 134700 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 113774 |||||||| || | ||| | | || | | | || | |||||||| || Sbjct 134699 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 134642 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834 ||||||| |||||| || || || || | ||| || ||||| || || | | Sbjct 134641 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 134582 Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894 | ||| | | |||||| | | ||||| | || || | | || |||| || || Sbjct 134581 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACCAGGTCCTTCAAGA 134522 Query 113895 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954 | || ||||| |||||||| || ||| || | | | ||||| || | | Sbjct 134521 GCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGG 134462 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 | || ||||| ||||| || || || |||| ||| || | || ||| || ||||| | Sbjct 134461 TATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAG 134402 Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074 | || | || | |||||| || | ||| | ||| ||| | || |||| |||| Sbjct 134401 GGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTCTCCC 134342 Query 114075 AGTCGTA---GTTG-AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||| | || | || | || | | | |||||||||||||||||||||||| | Sbjct 134341 AGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCA 134286 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAG 114187 || ||||| || |||| || | ||| || ||||| ||| || | || | ||| Sbjct 134285 GATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCACCGAG 134226 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 || | | || ||||| || || |||||||| || | |||| | ||| Sbjct 134225 GCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCC 134169 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307 ||| ||| || || | | || | || |||| || ||||| ||||||||| Sbjct 134168 TCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCG 134109 Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGATAAAAA 114364 | ||||| || || || | ||| || || || || ||| | | || || Sbjct 134108 ACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGTAGTGG 134052 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 || ||||||| | | || | || | |||||||| ||||| || || ||||| Sbjct 134051 TTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTC 133992 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGC 114480 | | | || | | || ||| | | | || || ||||||| || | ||| || Sbjct 133991 TGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAATGATGC 133936 Query 114481 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT 114540 ||||| || |||| | |||||| | || |||||| || || || || || | || Sbjct 133935 GAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTT 133876 Query 114541 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 114600 ||||| ||||||||||| |||||| || || || ||| || |||||||| Sbjct 133875 GGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTA 133816 Query 114601 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 114659 |||||| | || | || || || || || | || | || || | ||| | | || | Sbjct 133815 GAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTG 133756 Query 114660 CGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716 | || || ||| ||| || || ||| ||| ||||| ||| || | Sbjct 133755 GGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCT 133700 Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776 | ||||| ||||| | || | ||||| || || || ||||| | ||||| || Sbjct 133699 CGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCC 133640 Query 114777 ATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGA 114836 | | || || ||| |||||||||||||| || || |||||||| || || |||| | Sbjct 133639 AGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACA 133580 Query 114837 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 114896 || ||| ||| |||||||| | || || || |||| ||||| || || | | Sbjct 133579 AGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAA 133520 Query 114897 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAG 114950 || |||||||| || || ||||| | |||| | || ||| | | || Sbjct 133519 CGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTT--GTTG-CCGC 133463 Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAG 115010 |||||| || || | || ||| || || || || ||||| ||||||| ||||| | Sbjct 133462 CCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGG 133403 Query 115011 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATAC 115070 | ||| || || || ||| ||| |||| | || || | || | || Sbjct 133402 AGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGAC 133343 Query 115071 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGT 115130 | || || |||||| ||| ||||| || || | |||| || ||||||| |||| Sbjct 133342 CGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGT 133283 Query 115131 CGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 115190 |||| ||| |||| | | | ||||||||| |||| || ||| || |||| Sbjct 133282 CGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTAC 133223 Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTA 115248 | || ||||| |||||||||| ||||| |||||| |||| |||||| | ||| Sbjct 133222 CCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGTTGTA 133165 Query 115249 GGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 115307 |||||||| ||| || | ||||| || || || |||| | ||| ||||| | || Sbjct 133164 GGTCTCCAGGACACGCTCG-ATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCA 133106 Query 115308 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 115353 ||| || ||| || | | | ||||||| | || ||||||| Sbjct 133105 TGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 133060 >seq112 Length=604763 Score = 86.0 bits (94), Expect = 7e-12 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || ||||| ||||| || ||||| || || ||||| || || ||||||||||| Sbjct 339655 GTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATGAGACC 339596 Query 126118 CCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGATTCCCTCCACAC 126176 |||||||| | |||||| || | | | ||| | ||| |||||| || ||||| || Sbjct 339595 ACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTCAACGG 339537 Query 126177 ACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 ||||| |||| ||||||| ||||| || Sbjct 339536 CAGCGAAAGCAACCAGACGCTGGGCAAAAGA 339506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597348544895160