Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq24 214 2e-50
seq112 86.0 7e-12
>seq24
Length=306188
Score = 214 bits (236), Expect = 2e-50
Identities = 1131/1786 (63%), Gaps = 55/1786 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|||||||||||||| || |||||||| || |||||||| | | ||||| ||
Sbjct 134819 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 134760
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | ||| || || |||| || ||| | || || ||||||||||||
Sbjct 134759 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 134700
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 113774
|||||||| || | ||| | | || | | | || | |||||||| ||
Sbjct 134699 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 134642
Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834
||||||| |||||| || || || || | ||| || ||||| || || | |
Sbjct 134641 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 134582
Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894
| ||| | | |||||| | | ||||| | || || | | || |||| || ||
Sbjct 134581 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACCAGGTCCTTCAAGA 134522
Query 113895 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954
| || ||||| |||||||| || ||| || | | | ||||| || | |
Sbjct 134521 GCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGG 134462
Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014
| || ||||| ||||| || || || |||| ||| || | || ||| || ||||| |
Sbjct 134461 TATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAG 134402
Query 114015 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCC 114074
| || | || | |||||| || | ||| | ||| ||| | || |||| ||||
Sbjct 134401 GGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTCTCCC 134342
Query 114075 AGTCGTA---GTTG-AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130
|||| | || | || | || | | | |||||||||||||||||||||||| |
Sbjct 134341 AGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCA 134286
Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAG 114187
|| ||||| || |||| || | ||| || ||||| ||| || | || | |||
Sbjct 134285 GATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCACCGAG 134226
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
|| | | || ||||| || || |||||||| || | |||| | |||
Sbjct 134225 GCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCC 134169
Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307
||| ||| || || | | || | || |||| || ||||| |||||||||
Sbjct 134168 TCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCG 134109
Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGATAAAAA 114364
| ||||| || || || | ||| || || || || ||| | | || ||
Sbjct 134108 ACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGTAGTGG 134052
Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424
|| ||||||| | | || | || | |||||||| ||||| || || |||||
Sbjct 134051 TTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTC 133992
Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGC 114480
| | | || | | || ||| | | | || || ||||||| || | ||| ||
Sbjct 133991 TGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAATGATGC 133936
Query 114481 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT 114540
||||| || |||| | |||||| | || |||||| || || || || || | ||
Sbjct 133935 GAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTT 133876
Query 114541 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 114600
||||| ||||||||||| |||||| || || || ||| || ||||||||
Sbjct 133875 GGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTA 133816
Query 114601 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 114659
|||||| | || | || || || || || | || | || || | ||| | | || |
Sbjct 133815 GAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTG 133756
Query 114660 CGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716
| || || ||| ||| || || ||| ||| ||||| ||| || |
Sbjct 133755 GGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCT 133700
Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 114776
| ||||| ||||| | || | ||||| || || || ||||| | ||||| ||
Sbjct 133699 CGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCC 133640
Query 114777 ATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGA 114836
| | || || ||| |||||||||||||| || || |||||||| || || |||| |
Sbjct 133639 AGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACA 133580
Query 114837 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 114896
|| ||| ||| |||||||| | || || || |||| ||||| || || | |
Sbjct 133579 AGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAA 133520
Query 114897 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAG 114950
|| |||||||| || || ||||| | |||| | || ||| | | ||
Sbjct 133519 CGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTT--GTTG-CCGC 133463
Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAG 115010
|||||| || || | || ||| || || || || ||||| ||||||| ||||| |
Sbjct 133462 CCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGG 133403
Query 115011 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATAC 115070
| ||| || || || ||| ||| |||| | || || | || | ||
Sbjct 133402 AGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGAC 133343
Query 115071 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGT 115130
| || || |||||| ||| ||||| || || | |||| || ||||||| ||||
Sbjct 133342 CGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGT 133283
Query 115131 CGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 115190
|||| ||| |||| | | | ||||||||| |||| || ||| || ||||
Sbjct 133282 CGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTAC 133223
Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTA 115248
| || ||||| |||||||||| ||||| |||||| |||| |||||| | |||
Sbjct 133222 CCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGTTGTA 133165
Query 115249 GGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 115307
|||||||| ||| || | ||||| || || || |||| | ||| ||||| | ||
Sbjct 133164 GGTCTCCAGGACACGCTCG-ATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCA 133106
Query 115308 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 115353
||| || ||| || | | | ||||||| | || |||||||
Sbjct 133105 TGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 133060
>seq112
Length=604763
Score = 86.0 bits (94), Expect = 7e-12
Identities = 111/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| || ||||| ||||| || ||||| || || ||||| || || |||||||||||
Sbjct 339655 GTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATGAGACC 339596
Query 126118 CCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGAAGATTCCCTCCACAC 126176
|||||||| | |||||| || | | | ||| | ||| |||||| || ||||| ||
Sbjct 339595 ACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTCAACGG 339537
Query 126177 ACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207
||||| |||| ||||||| ||||| ||
Sbjct 339536 CAGCGAAAGCAACCAGACGCTGGGCAAAAGA 339506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597348544895160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |