Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq24 271 8e-68
>seq24
Length=306188
Score = 271 bits (300), Expect = 8e-68
Identities = 454/654 (69%), Gaps = 2/654 (0%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||||| ||| || |||||||| ||||| ||||||
Sbjct 133021 AACTACCAATACTTCGGCTTCAAGACTCTAGAGCGATCCTACCTCCTGAAGATCGATGGC 133080
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||||| || || || | ||||| ||||| |||| || || ||
Sbjct 133081 AAGATTGTTGAGCGACCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGTGAC 133140
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| | ||| || | | | || |||| |||| || || ||
Sbjct 133141 GACATCGAGCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTCACTCACGCT 133200
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GAT 93953
| || ||||||||||| ||||| ||||| ||| ||| ||||||| || ||||| | |
Sbjct 133201 TCACCAACCCTGTTCAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCCTGCTTCCTGGTT 133260
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| |||| ||| || | ||||| ||||||| ||||| | ||
Sbjct 133261 GAC-ATGAAGGAAGACAGCATCGACGGTATCTACGACACCCTCAAGACTTGTGCCATGAT 133319
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || || || || ||||| ||| || ||| | ||||||| || || ||
Sbjct 133320 CTCCAAGATGGCAGGAGGCATCGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCTTA 133379
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| ||||||||| ||||||||||| || || | ||||||||||| |||||||||||
Sbjct 133380 CATTGCCGGTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAA 133439
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || ||||| |||||||| || | | | ||| ||||||| | || ||
Sbjct 133440 CACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCT 133499
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
|||||||||||||| ||||| | ||| | || ||||| |||||||||||||| ||
Sbjct 133500 TGAGCCCTGGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGA 133559
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
| | || | ||| | |||| || || ||| | || || || || ||||| ||
Sbjct 133560 AGAAGCCCGCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCG 133619
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367
|||||||| ||| || ||||| ||| | || |||||||| || ||||| ||
Sbjct 133620 TGTCGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCT 133673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494719013404920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |