Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq24 271 8e-68 >seq24 Length=306188 Score = 271 bits (300), Expect = 8e-68 Identities = 454/654 (69%), Gaps = 2/654 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||| ||| || |||||||| ||||| |||||| Sbjct 133021 AACTACCAATACTTCGGCTTCAAGACTCTAGAGCGATCCTACCTCCTGAAGATCGATGGC 133080 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||||| || || || | ||||| ||||| |||| || || || Sbjct 133081 AAGATTGTTGAGCGACCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGTGAC 133140 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| || | | | || |||| |||| || || || Sbjct 133141 GACATCGAGCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTCACTCACGCT 133200 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GAT 93953 | || ||||||||||| ||||| ||||| ||| ||| ||||||| || ||||| | | Sbjct 133201 TCACCAACCCTGTTCAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCCTGCTTCCTGGTT 133260 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| |||| ||| || | ||||| ||||||| ||||| | || Sbjct 133261 GAC-ATGAAGGAAGACAGCATCGACGGTATCTACGACACCCTCAAGACTTGTGCCATGAT 133319 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || ||||| ||| || ||| | ||||||| || || || Sbjct 133320 CTCCAAGATGGCAGGAGGCATCGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCTTA 133379 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||||||||| ||||||||||| || || | ||||||||||| ||||||||||| Sbjct 133380 CATTGCCGGTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAA 133439 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||| |||||||| || | | | ||| ||||||| | || || Sbjct 133440 CACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCT 133499 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||||||||||| ||||| | ||| | || ||||| |||||||||||||| || Sbjct 133500 TGAGCCCTGGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGA 133559 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | || | ||| | |||| || || ||| | || || || || ||||| || Sbjct 133560 AGAAGCCCGCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCG 133619 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 |||||||| ||| || ||||| ||| | || |||||||| || ||||| || Sbjct 133620 TGTCGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCT 133673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719013404920