Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq24 215 6e-51 seq112 89.7 6e-13 >seq24 Length=306188 Score = 215 bits (238), Expect = 6e-51 Identities = 1137/1789 (64%), Gaps = 61/1789 (3%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || |||||||| | | ||||| || Sbjct 134819 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 134760 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | ||| || || |||| || ||| | || || |||||||||||| Sbjct 134759 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 134700 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 115735 || ||||| || | ||| | | || | | | || | |||||||| || Sbjct 134699 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 134642 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 ||||||| |||||| || || || || | ||| || |||||||| || | Sbjct 134641 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 134582 Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGA-GACCA-ATCTTCTTGAGATCCTCCAC 115853 | ||| | | |||||| | | ||||| | | ||| |||| | || |||| || Sbjct 134581 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACC--AGGTCCTTCAA 134524 Query 115854 GAG---GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 ||| | | ||| ||||| |||||||| || ||| || | | | |||||||| Sbjct 134523 GAGCCAGGGGTTA---ACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTT 134467 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 | || || ||||| ||||| || || || |||| ||| || | || ||| || || Sbjct 134466 CGAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGG 134407 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||| || || | || | ||||||||| | ||| | || ||| | || |||| Sbjct 134406 CATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGT 134347 Query 116031 GTCCCAGTCGTA---GTTG-AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATAC 116086 |||||||| | || | || | || | | | ||||||||||||||||||||||| Sbjct 134346 CTCCCAGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATAC 134291 Query 116087 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT--- 116143 | | || ||||| || |||| || | || || ||||| ||| || | || Sbjct 134290 CCTCAGATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCA 134231 Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203 | ||| || | | || ||||| || || |||||||| || | |||| | Sbjct 134230 CCGAGGCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCAC 134174 Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263 |||||| ||| || || | | || | || |||| || ||||| |||| Sbjct 134173 GAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGA 134114 Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGAT 116320 |||||| ||||| || || || | ||| || || || || ||| | | || | Sbjct 134113 CACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGT 134057 Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380 | || ||||||| | | || | || | |||||||| ||||| || || | Sbjct 134056 AGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTA 133997 Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATT 116436 |||| | | | || | | || ||| | | | || || ||||||| || | | Sbjct 133996 GCTTCTGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAAT 133941 Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496 || || ||||| || |||| | |||||| | || |||||| || || || || || Sbjct 133940 GATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAA 133881 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | || ||||| ||||||||||| |||||| || || || ||| || ||| Sbjct 133880 AGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCC 133821 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-C 116615 ||||||||||| | || | || || || || || | || | || || | ||| | | Sbjct 133820 TTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGC 133761 Query 116616 ATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 || | | || || ||| ||| || || ||| ||| ||||| ||| || Sbjct 133760 TTCTGGGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAG 133705 Query 116673 GGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731 ||| ||||| ||||| ||| || | ||||| || || || || || | || Sbjct 133704 CTTCTCGAACTCATCACCGT-AGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGA 133646 Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791 ||| ||| | || || ||| || ||||||||||| || || |||||||| || ||| Sbjct 133645 GAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCA 133586 Query 116792 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 |||| | || ||| ||| |||||||| | || || || |||| ||||| || | Sbjct 133585 AGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATT 133526 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC--TTGC--GACGA 116907 | | | || |||||||| || || ||||| | |||| | || | || | | Sbjct 133525 CAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTG- 133467 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 || |||||| || || | || || ||| || || || ||||| ||||||| |||| Sbjct 133466 CCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCA 133407 Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGC 117027 | || ||| || || || ||| ||| | |||| | || ||| | || Sbjct 133406 TTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTG 133347 Query 117028 ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATC 117087 | ||| || || |||||| ||| ||||| || || | |||| || ||||||| Sbjct 133346 AGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATA 133287 Query 117088 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGT 117147 || ||||| ||| |||| | | | ||||||||| |||| || ||| || Sbjct 133286 CCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGG 133227 Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTAT 117205 ||||| || ||||| |||||||||| ||||| |||||| |||| |||||| | Sbjct 133226 GTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGT 133169 Query 117206 CGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAA 117265 ||||||||||| |||| ||||| || || || |||| | ||| ||||| | Sbjct 133168 TGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGA 133109 Query 117266 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 117314 ||||| || ||| || | | | ||||||| | || ||||||| Sbjct 133108 TCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 133060 >seq112 Length=604763 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| || ||||| ||||| || ||||| || || ||||| || || ||||||||||| Sbjct 339655 GTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATGAGACC 339596 Query 127591 CCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 127649 |||||||| | |||||| || | | | ||| | ||| |||||| || ||||| || Sbjct 339595 ACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTCAACGG 339537 Query 127650 ACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 ||||| |||| ||||||| |||||| || Sbjct 339536 CAGCGAAAGCAACCAGACGCTGGGCAAAAGA 339506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613502008195320