Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq24 215 6e-51
seq112 89.7 6e-13
>seq24
Length=306188
Score = 215 bits (238), Expect = 6e-51
Identities = 1137/1789 (64%), Gaps = 61/1789 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||||||||| || |||||||| || |||||||| | | ||||| ||
Sbjct 134819 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 134760
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | ||| || || |||| || ||| | || || ||||||||||||
Sbjct 134759 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 134700
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 115735
|| ||||| || | ||| | | || | | | || | |||||||| ||
Sbjct 134699 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 134642
Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795
||||||| |||||| || || || || | ||| || |||||||| || |
Sbjct 134641 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 134582
Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGA-GACCA-ATCTTCTTGAGATCCTCCAC 115853
| ||| | | |||||| | | ||||| | | ||| |||| | || |||| ||
Sbjct 134581 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACC--AGGTCCTTCAA 134524
Query 115854 GAG---GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910
||| | | ||| ||||| |||||||| || ||| || | | | ||||||||
Sbjct 134523 GAGCCAGGGGTTA---ACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTT 134467
Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970
| || || ||||| ||||| || || || |||| ||| || | || ||| || ||
Sbjct 134466 CGAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGG 134407
Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030
||| || || | || | ||||||||| | ||| | || ||| | || ||||
Sbjct 134406 CATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGT 134347
Query 116031 GTCCCAGTCGTA---GTTG-AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATAC 116086
|||||||| | || | || | || | | | |||||||||||||||||||||||
Sbjct 134346 CTCCCAGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATAC 134291
Query 116087 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT--- 116143
| | || ||||| || |||| || | || || ||||| ||| || | ||
Sbjct 134290 CCTCAGATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCA 134231
Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203
| ||| || | | || ||||| || || |||||||| || | |||| |
Sbjct 134230 CCGAGGCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCAC 134174
Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263
|||||| ||| || || | | || | || |||| || ||||| ||||
Sbjct 134173 GAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGA 134114
Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGAT 116320
|||||| ||||| || || || | ||| || || || || ||| | | || |
Sbjct 134113 CACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGT 134057
Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380
| || ||||||| | | || | || | |||||||| ||||| || || |
Sbjct 134056 AGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTA 133997
Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATT 116436
|||| | | | || | | || ||| | | | || || ||||||| || | |
Sbjct 133996 GCTTCTGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAAT 133941
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| || ||||| || |||| | |||||| | || |||||| || || || || ||
Sbjct 133940 GATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAA 133881
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
| || ||||| ||||||||||| |||||| || || || ||| || |||
Sbjct 133880 AGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCC 133821
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-C 116615
||||||||||| | || | || || || || || | || | || || | ||| | |
Sbjct 133820 TTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGC 133761
Query 116616 ATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672
|| | | || || ||| ||| || || ||| ||| ||||| ||| ||
Sbjct 133760 TTCTGGGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAG 133705
Query 116673 GGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731
||| ||||| ||||| ||| || | ||||| || || || || || | ||
Sbjct 133704 CTTCTCGAACTCATCACCGT-AGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGA 133646
Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791
||| ||| | || || ||| || ||||||||||| || || |||||||| || |||
Sbjct 133645 GAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCA 133586
Query 116792 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851
|||| | || ||| ||| |||||||| | || || || |||| ||||| || |
Sbjct 133585 AGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATT 133526
Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC--TTGC--GACGA 116907
| | | || |||||||| || || ||||| | |||| | || | || | |
Sbjct 133525 CAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTG- 133467
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967
|| |||||| || || | || || ||| || || || ||||| ||||||| ||||
Sbjct 133466 CCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCA 133407
Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGC 117027
| || ||| || || || ||| ||| | |||| | || ||| | ||
Sbjct 133406 TTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTG 133347
Query 117028 ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATC 117087
| ||| || || |||||| ||| ||||| || || | |||| || |||||||
Sbjct 133346 AGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATA 133287
Query 117088 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGT 117147
|| ||||| ||| |||| | | | ||||||||| |||| || ||| ||
Sbjct 133286 CCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGG 133227
Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTAT 117205
||||| || ||||| |||||||||| ||||| |||||| |||| |||||| |
Sbjct 133226 GTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGT 133169
Query 117206 CGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAA 117265
||||||||||| |||| ||||| || || || |||| | ||| ||||| |
Sbjct 133168 TGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGA 133109
Query 117266 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 117314
||||| || ||| || | | | ||||||| | || |||||||
Sbjct 133108 TCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 133060
>seq112
Length=604763
Score = 89.7 bits (98), Expect = 6e-13
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| || ||||| ||||| || ||||| || || ||||| || || |||||||||||
Sbjct 339655 GTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATGAGACC 339596
Query 127591 CCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 127649
|||||||| | |||||| || | | | ||| | ||| |||||| || ||||| ||
Sbjct 339595 ACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTCAACGG 339537
Query 127650 ACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680
||||| |||| ||||||| |||||| ||
Sbjct 339536 CAGCGAAAGCAACCAGACGCTGGGCAAAAGA 339506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613502008195320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |