Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq24 104 4e-17
>seq24
Length=306188
Score = 104 bits (114), Expect = 4e-17
Identities = 446/684 (65%), Gaps = 26/684 (4%)
Strand=Plus/Minus
Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTTCTCAGATAGTACATGCCGGT 203901
|| || |||||||| |||| | || |||||| | || | | || ||||||||||||||
Sbjct 134858 TCAACAGTGAACTGGATGG-GAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGT 134800
Query 203902 CTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTC 203961
||| || || || ||| || | ||||||| | | |||| || |||||||
Sbjct 134799 CTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTGATCTTGCCCATTGTGGGGTC 134740
Query 203962 GGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCA 204020
|||||| ||||| || ||||| || |||||| ||||| || ||||| |||| ||
Sbjct 134739 TTTCATGTGGATGTTGAGGGACTGAGACTGATCGATG-AAGGCACCACGATCGGCGGACA 134681
Query 204021 TATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGT 204077
| | || | ||| | || ||||||||||||||||||||| | | || || | |||
Sbjct 134680 TTTGGAGGACCTGGCGT--TGGGAAATCTCCCACACCGTCTTGTAGAGCGACT-TAATGT 134624
Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
| || | | | | || || ||| || ||||| || | || | | || ||
Sbjct 134623 CGTCCGGAATGT-TAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGATGCGGTTCTTC 134565
Query 204137 GTCTCCTCCCCCCACATGCCCA-ACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | ||| ||||| ||||| | || | ||| ||| || || |||||| | |
Sbjct 134564 ATGGCATCCGACCACAAGCCCATATCT-ACCAGGTCCTTCAAGAGCCAGGGGTTAACAAC 134506
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || || | || || | || | | | ||| ||| | || |||||
Sbjct 134505 CTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGCTCGAAGCA 134446
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
||||| ||||| | ||||| | || ||||| || ||||| || || || |||| |
Sbjct 134445 TTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGAAGCAAGCT 134386
Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT---CCAGTCGTGCA--TC 204370
|||||| | ||||| | | ||| ||| || ||| |||||| | ||
Sbjct 134385 GTTGCGAATACCGTGCTCCTTAACC---TGCTCGCGAAGGGTCTCCCAGTCCCAAAGGTC 134329
Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430
| | ||| |||||| |||||| || ||||| | ||| || | | ||||| |||
Sbjct 134328 GGA--GGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGATGCTGGGGAACCC 134271
Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCATGGCGTG 204489
||| | | | ||||| ||||| | || || ||||| |||||| | || ||
Sbjct 134270 TTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAG-TTGCACCGAGGCCGTCAAAGCAGC 134212
Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513
| ||| |||||||||||||||||
Sbjct 134211 GTGGTAAATGGTCTCAAAGATCTG 134188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795148470999120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |