Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24 158 1e-33 >seq24 Length=306188 Score = 158 bits (174), Expect = 1e-33 Identities = 560/868 (65%), Gaps = 23/868 (3%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || || || | |||||| | |||||||||||| |||||| | | |||||| | Sbjct 133952 GGCAGAGCCAATGATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATG 133893 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | ||||||||| ||| || |||| ||||| ||||| || || | Sbjct 133892 ATCTCAGTGCAAAGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGG 133833 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||||||| | || | || || || ||||| | || | || Sbjct 133832 TTGCAGCTGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATG 133773 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTA 106692 || | ||||| | || | | || |||| ||| | || | || || ||| || Sbjct 133772 GCATACCACAGCTTCTGGGCCT----TCATGGTCTTGCGACCTTTGCCAGCCTGCTCATA 133717 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| ||| || || ||||| ||||| || | || || || || | Sbjct 133716 CTTCTCGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATT 133657 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || || | |||| ||| | || || ||| || ||||||||||| || || || || Sbjct 133656 GGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGAT 133597 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 |||||||| | || | || | | || || ||||| | || ||||| || | Sbjct 133596 CCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAG 133537 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA------GA 106926 || | ||| || | | || |||||||| |||||||| || | |||| | | Sbjct 133536 ATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGG 133477 Query 106927 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 || ||| | | ||||| || | || || || || ||| ||| || || || |||| Sbjct 133476 TCGCTTGTTGCCGCCC----TGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCA 133421 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045 | ||||| | ||||| || || || || || ||| ||| |||| | | Sbjct 133420 TAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGA 133361 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 || | || | || || || || ||| ||| ||||| ||||| | | | Sbjct 133360 TTCGGTGCACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGA 133301 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 | || | |||||||||| ||| ||| ||||| || | | |||||||| |||| Sbjct 133300 GGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACA 133241 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 107225 ||| || || ||||| |||||||| |||||||||| |||||| ||||| | ||| Sbjct 133240 GCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAAC--AGCTT 133183 Query 107226 G--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 | |||||| || ||| ||||||| |||| || ||||| || || |||||||| Sbjct 133182 GCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGAC 133123 Query 107284 GGCCACACGCATAAACATGTATTGGGGT 107311 || |||||||| | ||||| || ||| Sbjct 133122 AGCGACACGCATGATCATGTGCTGAGGT 133095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975807287480