Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq388 104 2e-17
seq284 98.7 6e-16
>seq388
Length=11445
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| ||||| || ||||| ||||| ||||| ||| |||| |||| ||
Sbjct 9249 ACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCA 9308
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || ||||| || ||||| | || | |||||||||||
Sbjct 9309 AGCTGCTTGCCGGCGAAGATAAGTCGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 9368
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | ||| || || | ||| || || ||
Sbjct 9369 ATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 9428
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||||||| ||||| || ||||||||||| ||
Sbjct 9429 CCCGTGAGGGTCTTGACGAAGATCTGCATCTT 9460
>seq284
Length=28030
Score = 98.7 bits (108), Expect = 6e-16
Identities = 152/215 (71%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| ||||| || || ||||||||||| || || ||| | || |||| ||
Sbjct 19907 AACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCATCCTC 19848
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || || ||||| || ||||| ||||||||| | || | |||||||||||
Sbjct 19847 CAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 19788
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||||||| ||||| || | ||||| ||| | || || |||| || || |
Sbjct 19787 AATCTTCGACTTGAC--AT--TGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCG 19732
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || ||||| ||||| || || |||||||||
Sbjct 19731 TCTTGCCGGTGAGGGTCTTGACGAAAATCTGCATA 19697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630921468456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |