Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq160 84.2 2e-11 >seq160 Length=69848 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/228 (70%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 30159 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30218 |||||| || || || |||| |||||| |||||||| || || || ||||| || |||| Sbjct 46524 GTACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAAACAGGACCAAGGTCGCCGACTTC 46583 Query 30219 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30278 | ||| | || ||||| | || || | || ||||| ||||||| ||||| Sbjct 46584 GCGATGCGTTAGACCGAGGTTGTCGAGGAACTCACGAGAGCCGTTTCCGTCCCAAATCTT 46643 Query 30279 TACCCC--CTTCTCGGAGAGCTCTTTGGAGTTTGTGG-ACCCTCTGACGAACCACAGCAG 30335 | || | || | ||| | |||||| || ||| |||||| || |||||| || || Sbjct 46644 GATGCCGGCATCGCTGAGGG-TCTTTG-AGGAAGTGTTACCCTC-GATGAACCAGAGAAG 46700 Query 30336 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||| | | |||||| |||||| | |||||| ||||||||||| Sbjct 46701 CTCGACGATGACGGCTCGTGTAAAGACGCGCTTGGTGGTGAGGAGGGG 46748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408614228521721