Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq24 334 1e-86
seq112 129 1e-24
>seq24
Length=306188
Score = 334 bits (370), Expect = 1e-86
Identities = 1230/1884 (65%), Gaps = 92/1884 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| |||| |||||| ||||||| || |||||||||||||||||
Sbjct 134855 ACAGTGAACTGGATGGGAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGTCTTG 134796
Query 212613 AGGCC---CTTGCCCCAGCCGTGC-ATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667
|| || ||| |||||| ||| | |||||| |||| ||| |||| | ||
Sbjct 134795 AGACCGAGCTT---CCAGCC-TGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATTG 134747
Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727
| |||| | | |||| | ||| ||||||||| ||| || ||||| |
Sbjct 134746 TGGGGTCTTTCATGTGG---------ATGTTGAGGGACTGAGACTGATCGATGAAGGCAC 134696
Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787
| | || |||| ||| | | || | | ||||| | ||||||||| |||||| |||
Sbjct 134695 CACGATCGGCGGACATTTGGAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGA 134636
Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGG 212844
|| | ||| || || | | ||||||||||| | ||| || | | |||
Sbjct 134635 GCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGA 134576
Query 212845 TCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGG 212903
| | | | |||| | || ||| | |||| | ||| ||||| ||| | ||
Sbjct 134575 TGCGGTTCTT---CATGGCATCCGACCACAAGCCCATA-TCTACCAGGTCCTTCAAGAGC 134520
Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963
||||| || | |||||| ||||| | || || | | |||||| | ||| || ||
Sbjct 134519 CAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTA 134460
Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023
|| ||||||| || ||||| || ||||| ||||| | ||| ||||| || ||||| ||
Sbjct 134459 TAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGG 134400
Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC-CGAAGC-TCTGCCC 213081
|| | || | ||||| | | |||||||| | | || | ||||| ||| |||
Sbjct 134399 GCGAGAAGCAAGCTGTTGCGAATACCGTGCTC-CTTAACCTGCTCGCGAAGGGTCT-CCC 134342
Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141
||||||| ||||| | ||||||||||||||| |||||||| | ||| |
Sbjct 134341 AGTCCCAA---------AGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATAC 134291
Query 213142 CTT----TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197
| | |||| ||| |||| | | ||||| || || | |||||| || ||
Sbjct 134290 CCTCAGATGCT----GGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGT 134235
Query 213198 TCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256
| ||| || ||| || ||||||| ||| ||||| ||||| |||| | |||| | ||
Sbjct 134234 T-GCACCGAGGCCGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTC 134176
Query 213257 CTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTG 213316
||||| |||||| ||||||||| | |||| ||||||| || |||||
Sbjct 134175 ACGAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTG 134116
Query 213317 GACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTA 213376
||| |||| || ||||||| ||| | || ||| ||| | ||| | ||||||
Sbjct 134115 GACACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTA 134056
Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAG 213436
|||| |||||| |||||||| | ||||||| | | || | ||||| | | ||
Sbjct 134055 GTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAG 133996
Query 213437 GTACTCGTGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGA-TGC 213492
| || | | | | | ||||| ||| | ||||| |||||| || | ||
Sbjct 133995 CTTCTGGAAGTCGTA---GCAGCCCTCGTTGTAGTCAACAAAGGAAGGCAGAGCCAATGA 133939
Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCAC 213551
|| | || |||||||| || ||||| | | ||| | |||||| |||||||| |||||
Sbjct 133938 TG-CGAGATTGCAAACAGCGACCTCATCGGGAG-CACAGTACTCGATGATCTCAGTGCAA 133881
Query 213552 AGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TC 213610
|||||| | || |||||||||||||||| ||||| | ||| || | |||| ||
Sbjct 133880 AGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTT-GCTTTTACGGTTGCAGCTGTC 133822
Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668
||||||||||||| | ||| ||||| || ||| | | ||| || ||| |||
Sbjct 133821 CTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGAT--GGCATACCAC 133764
Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728
|| | | |||||| | | | ||| | | || | ||| |||| |||||
Sbjct 133763 AGCTTCTGGGCCTTCATGGTCTTGC-GACCTTTGCCAGCCTG--CTCATACTTCTCGTAC 133707
Query 213729 AGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACAT 213787
|||| | ||| || | || || | | | | || || || || ||| |||||
Sbjct 133706 AGCTTCTCGAACTCATCACCGTAGCAATCAG-CAAGCCCGGGGCACTCATTGGGGCACAT 133648
Query 213788 GAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846
||| ||||||| |||| | |||| ||| | || ||||||||| || |||| |||||| |
Sbjct 133647 GAGAGTCCAGTCGCCGTTCTTCTC-GACACGCTTCATGAACAGATCGGGGATCCACAGGG 133589
Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906
| ||||| ||| | | | || ||| || ||| ||||||||||| | |
Sbjct 133588 CCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGA 133529
Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963
| ||||| | ||| |||||||| ||||| | ||| ||||| || || || | || | |
Sbjct 133528 ATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGT 133469
Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023
||||||||||||| || | || ||||||||| || || | || | | |
Sbjct 133468 TGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACAC 133409
Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCAT 214081
| ||||| |||||||| || || || || ||||||| ||| | | | ||| | |
Sbjct 133408 CATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGT 133349
Query 214082 GGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141
|||| || ||||| || || ||||||||||||||| || | | | || ||
Sbjct 133348 TGAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTA 133291
Query 214142 GATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201
||| ||| | |||||||| || | | || | || ||||||| || ||||| |||
Sbjct 133290 GATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTG 133231
Query 214202 GGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261
| | || | ||||| || || || || || | | | |||| | || | |||
Sbjct 133230 AGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAG 133171
Query 214262 CCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCAT 214321
|||||||||||||||| |||||||| ||| | |||| | |||
Sbjct 133170 GTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCAT 133111
Query 214322 CAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTG---GGGCCCTTGAGCAGGTAGGAGCG 214378
| ||||||||| || | ||| | || ||| | ||| || |||||||| ||
Sbjct 133110 GATCATGTGCTGAGGTCGCTC-AACAATC--TTGCCATCGATCTTCAGGAGGTAGGATCG 133054
Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402
||| ||||||||||| || |||||
Sbjct 133053 CTCTAGAGTCTTGAAGCCGAAGTA 133030
>seq112
Length=604763
Score = 129 bits (142), Expect = 1e-24
Identities = 344/520 (66%), Gaps = 17/520 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || | | |||||||||||
Sbjct 339958 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 339899
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957
||||||| ||||||||||| | || || | | | || ||| || || | |
Sbjct 339898 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCT-TCTCGTTGCCAAGTGCCACAAGAA 339840
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || || || |||||||||||| ||||||| ||||||||| | || |
Sbjct 339839 GACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAG 339780
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
|||| |||| || || ||||||| ||| || | || || || | ||||
Sbjct 339779 CGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCT 339720
Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTT---GGCATAGAGCATG---C 48131
||| || |||| ||| || ||| ||| | | || | | | |
Sbjct 339719 C----ACGAATGA-TCTGC----TTGCTGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGAC 339669
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
|||| ||||| |||||| ||| || || || |||||| |||||||||| | |
Sbjct 339668 AGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGC 339609
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||||||||| || | || ||||||||||| || | |||||||| ||| |||||| |
Sbjct 339608 CAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAAAA 339549
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
| ||||| || || ||||| || || | || | ||||| | ||||||||| ||
Sbjct 339548 TACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTGGA 339489
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|||| || ||||| || |||||||| |||||| ||
Sbjct 339488 TCCACCGAATAGCCCAATCGGCCTTCTTTCGGATGCAAGG 339449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931524916903680
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