Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 >seq3 Length=149029 Score = 96.9 bits (106), Expect = 4e-15 Identities = 172/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 || || || | ||| || || | || ||||| | ||||| ||||| ||||| || || Sbjct 110677 AGGCCCTCGGGACCGTGGTAAACGGCGTAGAAGGCCGACATGTTTGCCAGCAGGGCCTGG 110736 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||||||||| ||||| || || || | || || |||||||| | || || || Sbjct 110737 GCGGTGCAGATGTTGCTGGTGGCCTTTTCACGTCGGATGTGCTGCTCGCGGGTCTGCAGC 110796 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | | ||| | ||||| || || ||| || || | |||||| || Sbjct 110797 GCAAGACGAAGCGCACGCTTGCCCAGGCGATCTTTCGACACGCCGACGAGTCTGCCGGGG 110856 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||| | ||| ||||| || || || || ||||| ||||| ||||| || ||| | || Sbjct 110857 ATCTTGCGCTTGTACTTTTCAGTGGTCGCGAAGAAGGCAGCGTGAGGTCCGCCGAAGCCT 110916 Query 139500 ATAGGAATACC 139510 | |||| ||| Sbjct 110917 AGGGGAACACC 110927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993500226040