Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq24 125 6e-24
seq284 98.7 9e-16
seq388 84.2 2e-11
>seq24
Length=306188
Score = 125 bits (138), Expect = 6e-24
Identities = 463/716 (65%), Gaps = 17/716 (2%)
Strand=Plus/Minus
Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360
|||| ||||| ||||| || | ||||| ||||||||| |||| ||| || | |
Sbjct 133723 GCTCATACTTCTCGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGC 133664
Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420
||| | || |||||||| | ||| |||||||| || ||| ||| ||||||||||||
Sbjct 133663 ACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGAT 133604
Query 139421 CCGGAATCCACAAAGCGAACAGCAAAT--CGCGCGCCTTCTTATCTTCCGAACCCATGTT 139478
| || ||||||| || || | ||| | || |||| || |||||| || |||
Sbjct 133603 CGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCT--TCTTCCTTGCCGTGGTT 133546
Query 139479 ACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538
|| | | ||| ||||||||||| |||||||| || || || || ||||| |
Sbjct 133545 CTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAA 133486
Query 139539 TGCGCC---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595
|| || | | ||||| || || ||||||| ||| ||| || ||||| || ||
Sbjct 133485 AGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACG 133426
Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATGGGACTGTTGCGA 139653
| ||| || | ||| | | || |||||||| | ||| ||| | | |
Sbjct 133425 GAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTAC--CGGCAATGTAAGAGCCGGTG 133368
Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713
|| |||| || || |||| ||||| || || | | ||||| || | | |||
Sbjct 133367 GCACGGATTCGGTGCACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAA 133308
Query 139714 -TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772
|| | | || ||||| ||||| |||||||| |||| ||| ||||| |||||
Sbjct 133307 GTCTTG-AGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCA 133249
Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832
|| || || || || | || || || ||||| || || ||||| |||||
Sbjct 133248 GGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAA 133189
Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892
|| | | ||||| | | ||| || || | | | | | | || || || |||
Sbjct 133188 CAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGAT 133129
Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952
||||||| ||| ||||| | ||| || || || || | | | ||| ||||| ||
Sbjct 133128 GCCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTT 133069
Query 139953 tttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| || | || |||||| |||||| |||| ||||| |||||||||||
Sbjct 133068 CAGGAGGTAGGATCG--CTCTAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATC 133015
>seq284
Length=28030
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || ||||| ||||| || ||| | |
Sbjct 19698 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAATCTTCT 19757
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| |||||||| || || || || || || ||
Sbjct 19758 GATACTATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAG 19817
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | || ||||| || || |||||||||||| | | | || ||||| |||
Sbjct 19818 CAGCGACTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGTGATTACAAC 19877
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| ||||| || ||| ||||
Sbjct 19878 ATTCAGAAGGAGTCGACCCTTCACCTGGT 19906
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || ||||| ||||| || |||||||||| || ||
Sbjct 19326 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAGCGCCTGATCTTTGCTGGCAAG 19385
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| ||| | | || || || ||||| ||||||||||| || || |||
Sbjct 19386 CAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATCCAAAAGGAATCTACCCTTCAC 19445
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
| || | || | ||||| ||
Sbjct 19446 CTCGTCCTCCGTCTTCGCGGTGG 19468
>seq388
Length=11445
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || || || || || || | |
Sbjct 9458 GATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 9399
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || ||||| || || || ||
Sbjct 9398 CGACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 9339
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| || | ||||| ||||| || ||||| || ||| ||| | || || || ||
Sbjct 9338 ACAGCGACTTATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGAACCCTGAGCGACTACAA 9279
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| || || ||| |||||
Sbjct 9278 CATCCAGAAGGAGAGCACTCTTCACCTGGTG 9248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893792741560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |