Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq284 132 9e-26
>seq284
Length=28030
Score = 132 bits (146), Expect = 9e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| | ||| || || || || ||||| || || |||||| || | | |||
Sbjct 19913 ACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACC 19854
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || |||||||| || |||| || || ||||| || || || |||||
Sbjct 19853 ATCCTCCAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTT 19794
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| | || ||||| || || |||||| || ||| || || | ||| ||
Sbjct 19793 GTCTTGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAAT 19734
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||| || | ||||| || || ||||||||
Sbjct 19733 CGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 19698
Score = 95.1 bits (104), Expect = 2e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | ||| || |||||||| || || || || || || |
Sbjct 19470 TACCACCGCGAAGACGGAGGACGAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGG 19411
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || ||| || || || || || || ||||||||||| || | ||||| || || |
Sbjct 19410 AGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGG 19351
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||| || || ||||| | || ||||| || || ||||| || || |
Sbjct 19350 GGATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGA 19291
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798
| || | || || |||||||| || | ||||| ||
Sbjct 19290 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 19254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981818683569503
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |