Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq24 271 7e-68 seq284 113 4e-20 seq112 111 2e-19 seq388 98.7 1e-15 >seq24 Length=306188 Score = 271 bits (300), Expect = 7e-68 Identities = 1010/1552 (65%), Gaps = 67/1552 (4%) Strand=Plus/Minus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| ||||| || || || || || ||| | || | ||| ||| | || Sbjct 134513 TTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGC 134454 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 || || | ||||| ||||||| ||||||| || | || || ||||| || | Sbjct 134453 TCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGA 134394 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG-CGCTTCAGAGCCGCCCAGTCCCA 148438 |||| |||||| | |||| | | || | | ||| || | | |||||||||| Sbjct 134393 AGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGA-AGGGTCTCCCAGTCCCA 134335 Query 148439 GAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCG-CGGCTAGCGGGGC 148497 || || || ||||||||||||| || |||| || || || | | | || ||| Sbjct 134334 AAGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGAT-GCTGGGG 134276 Query 148498 TGCCCTCGTA-CGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCG-CCTCGAG 148555 |||| | | | || ||| || || | | || || |||| ||| | | || | Sbjct 134275 AACCCTTGAAGCTAGA-GTAAGGACCCTCCTCCTTAGCGAGTT-GCACCGAGGCCGTCAA 134218 Query 148556 CGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGCCGACTCGCT 148612 || ||| |||||| ||||| || ||| |||| | | | ||| | | | Sbjct 134217 AGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGG---GGA 134161 Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672 ||| | ||||| || || || || || || ||||| ||||| || || || ||||| Sbjct 134160 CTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGACACCAAT 134101 Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC-GAGCGGATAGTGGTTGCGGTCGA 148731 ||| ||||| |||||| | ||| || ||| || || ||||||||| ||||| Sbjct 134100 GGGTCGGTGACGCATGTTGCTGTTGCGGGC-CTCGATGATGGGGTAGTGGTTGACGTCGA 134042 Query 148732 TGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCG 148790 | ||||||| |||| ||||| || || |||| ||| | | | ||| | || ||| Sbjct 134041 TAATCTTGTTCAAG-TTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAAGTCG 133983 Query 148791 TAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCAC 148841 || |||| || || | | | | || || | || || |||||||| Sbjct 133982 TAGCAGCCCTCGTTGTAGTCAACAAAGGAAGG---CAGAGCCAATGATGCGAGATTGCAA 133926 Query 148842 ACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG---CTGCAT 148898 || || |||||| || || | |||||| | |||||| | ||| || ||| |||| Sbjct 133925 ACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGA 133866 Query 148899 TTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATG 148958 || | ||||| |||||| || ||||| || | |||||| ||||||||| |||||| Sbjct 133865 ATGGT---GCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGCATG 133809 Query 148959 TACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGC 149016 | || ||| ||||| ||| | |||| ||| | | | ||| | ||| || Sbjct 133808 AAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCA--CAGCTTCTGGGC-- 133753 Query 149017 GCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTATAAAGTATACAGCCGCTCGA 149070 ||| || || | |||||| | ||||||| || |||||| ||||| Sbjct 133752 ---CTTCATGGTCTT-GCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCGA 133697 Query 149071 ACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACA 149130 || | || ||||||||||| | || |||||||||| | ||||||||||| | ||| Sbjct 133696 ACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGT 133637 Query 149131 CGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGT 149190 |||||| | | || |||||||| ||||||||||| | ||| || || | | | || Sbjct 133636 CGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGT 133577 Query 149191 CGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGT 149250 | || || | ||||| ||| ||| |||||| | | | || | || Sbjct 133576 CACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGT 133517 Query 149251 CCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGT 149307 | |||||||| ||||||| ||| | |||| || || |||||| |||||||||| Sbjct 133516 CGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGT 133457 Query 149308 CGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC---TGGCAG 149364 |||||| || | ||||||| || || || | |||||| |||| ||| ||| | Sbjct 133456 CGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGG---AATGACACCATTGGAGG 133400 Query 149365 TGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGA 149424 ||||||| ||| | |||| | |||| || || | | ||||||||||| |||| Sbjct 133399 TGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGA 133340 Query 149425 TGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTC 149482 |||| || ||| | ||| ||||| || | |||| ||| || |||||| || || Sbjct 133339 TGCCTCCTGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATACCGTC 133282 Query 149483 GATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCC 149542 ||||||||| ||||||| | ||| ||||| || ||| || || | | || || Sbjct 133281 GATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACC 133222 Query 149543 GGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACG 149601 || ||||| ||| || ||||| || || | || |||| ||| | | ||| | Sbjct 133221 CGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGG-ACATGAGGTTGTAGG 133163 Query 149602 ACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATAT 149661 ||| || || || || ||||| || || |||||| | ||||| ||||| | ||| | Sbjct 133162 TCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCATGT 133103 Query 149662 GCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCT 149721 |||| |||||||| | | ||| | || || || | |||| ||||| |||| Sbjct 133102 GCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCT 133043 Query 149722 TGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 || |||| ||||| | ||||| || || ||| | | | | ||||| | ||| Sbjct 133042 TGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGACGATGGCAGAGTC 132991 >seq284 Length=28030 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || |||||||| | || ||| ||| | ||||| |||||||| | Sbjct 19895 GGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCA-TCCTCCAGCTGCTTAC 19837 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || ||||||||||| || |||||||| |||||||| ||||| || Sbjct 19836 CAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTCGACT 19777 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | | || || |||| || | || |||||||| || | Sbjct 19776 TGACATTGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGG 19717 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 19716 TCTTGACGAAAATCTGCAT 19698 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || | | | ||||| |||||||| || Sbjct 19666 GTTGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCAAGCTGCTTTCC 19608 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 19607 GGCGAAGATGAGTCGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAATCTTCGACTT 19548 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | |||||| || | ||||| || || ||||||| || Sbjct 19547 GACATTGTCGATCGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTACCGGTCAAGGT 19488 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 19487 CTTGACAAAGATTTGCAT 19470 Score = 96.9 bits (106), Expect = 3e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| ||||||||||||||| || Sbjct 19155 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCC 19096 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||||||||| |||||||| |||||| ||| Sbjct 19095 AGCGAAGATAAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 19036 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | || | ||||| | || ||| || || | |||| ||| || || |||| Sbjct 19035 AACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCCGTCA 18980 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || | || || ||||| |||||||| ||||| || |||||| Sbjct 19396 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTG 19337 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | || || | | ||| || |||| ||||| | Sbjct 19336 TCCTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGACCTCGAGGGTGATG 19277 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || ||||| || || || || |||| Sbjct 19276 GTCTTGCCAGTGAGGGTCTTGACGA 19252 >seq112 Length=604763 Score = 111 bits (122), Expect = 2e-19 Identities = 343/519 (66%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || ||||| | | || ||||| | Sbjct 339958 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 339899 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTA-AAGTATTTCGGCTGGCCCAACTGT-ACGAGC 120468 ||| || ||||| |||||| | || || | || | || |||| || || || Sbjct 339898 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG--CCAAGTGCCACAAGA 339841 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || |||||||| ||||| | |||| | || |||||||||||| | Sbjct 339840 AGACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGA 339781 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || |||| ||| || | ||||||| ||| |||| || || || ||| || Sbjct 339780 GCGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATC 339721 Query 120589 GCGAGCATAGTGTGGCCG--GGCATCTTGTGTTCGA-TGCGCGTTCGGTAGTACAGGCAC 120645 | | || | || | ||| || | ||| | || | || |||| | | || Sbjct 339720 TCACGAATGATCTGCTTGCTGGC-TCGGTTCTTCAAGTGAGAGT---GTAGGAGA--CAG 339667 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 || ||||| |||||||||||||| || || || || ||||||||| || |||| ||| Sbjct 339666 GCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCA 339607 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGG-CGGCAAAGCTGCCCGAAAAGAACAC 120764 ||||||| || | |||||| |||| |||| || ||||| || ||||| | Sbjct 339606 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGC-ACCACTGAAGAAAAT 339548 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 ||||| ||| || || || |||| |||| ||| || | | ||||| | ||| Sbjct 339547 ACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTGGAT 339488 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 |||| || ||||| |||||||| || || | ||| || Sbjct 339487 CCACCGAATAGCCCAATCGGCCTTCTTTCGGATGCAAGG 339449 >seq388 Length=11445 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || || | | | || || ||||||||||| ||| Sbjct 9266 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCA-TCTTCAAGCTGCTTGCCGGCGA 9324 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||| ||||| || || || || |||||||| |||||| ||||| | Sbjct 9325 AGATAAGTCGCTGTTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGT 9384 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||||| | |||||| || | ||||| || || || || || || || | Sbjct 9385 TGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 9444 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 9445 CGAAGATCTGCAT 9457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416709051480