Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq24 84.2 2e-11
>seq24
Length=306188
Score = 84.2 bits (92), Expect = 2e-11
Identities = 180/269 (67%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 138142 ACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTCTA 138201
|||||||| |||||||| ||| | || || |||||||||||| ||||| ||
Sbjct 133352 ACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCG 133293
Query 138202 TAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGGC 138261
||||| |||| ||||||||||||| |||| | || | || || |||| ||||||
Sbjct 133292 TAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGC 133233
Query 138262 ATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGTAAACATTTTCGAGCGCATC 138321
| || || ||| || || || |||||| || |||| || | |||
Sbjct 133232 TGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATG 133173
Query 138322 AATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACACGC 138381
| | || | ||| | ||| |||||| || ||||| || | ||||||||||
Sbjct 133172 AGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGC 133113
Query 138382 ATCAGCATGTGTTGAGGTCTCTCGACGAT 138410
|| | |||||| ||||||| ||| || ||
Sbjct 133112 ATGATCATGTGCTGAGGTCGCTCAACAAT 133084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445090633388640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |