Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq24 91.5 5e-13 seq112 84.2 7e-11 >seq24 Length=306188 Score = 91.5 bits (100), Expect = 5e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| ||||||| ||||||||| ||||| |||||||| || || ||| ||| Sbjct 133414 ATTCCTATGCTCCGTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAG 133473 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATT 255085 || || || || ||| |||| ||||| ||||| |||||||||||| || Sbjct 133474 CGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTGGCACGCCGACGTT 133521 >seq112 Length=604763 Score = 84.2 bits (92), Expect = 7e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || ||||| |||| || || || | || || || || ||||| || ||| Sbjct 339516 AGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGT-GCTTTCGCGTCC 339574 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || |||||||| || |||| || |||| || ||||| || || Sbjct 339575 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATT 339634 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| || ||||| |||| ||||||||||||||| || Sbjct 339635 TCTCGTGATGAGGGCCTGCACACCGACTTCGCCTGTCTCCT 339675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588322222674265