Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq24 91.5 5e-13
seq112 84.2 7e-11
>seq24
Length=306188
Score = 91.5 bits (100), Expect = 5e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037
|| || ||| ||||||| ||||||||| ||||| |||||||| || || ||| |||
Sbjct 133414 ATTCCTATGCTCCGTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAG 133473
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATT 255085
|| || || || ||| |||| ||||| ||||| |||||||||||| ||
Sbjct 133474 CGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTGGCACGCCGACGTT 133521
>seq112
Length=604763
Score = 84.2 bits (92), Expect = 7e-11
Identities = 116/161 (72%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766
|||| || || ||||| |||| || || || | || || || || ||||| || |||
Sbjct 339516 AGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGT-GCTTTCGCGTCC 339574
Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826
||||||||| | || |||||||| || |||| || |||| || ||||| || ||
Sbjct 339575 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATT 339634
Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| || ||||| |||| ||||||||||||||| ||
Sbjct 339635 TCTCGTGATGAGGGCCTGCACACCGACTTCGCCTGTCTCCT 339675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588322222674265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |