Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq24 219 5e-52
seq112 100 4e-16
>seq24
Length=306188
Score = 219 bits (242), Expect = 5e-52
Identities = 1132/1786 (63%), Gaps = 55/1786 (3%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|||||||||||||| || |||||||| || |||||||| | | ||||| ||
Sbjct 134819 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 134760
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| |||| | || || || |||| || ||| | || || ||||||||||||
Sbjct 134759 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 134700
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCC 118014
|| ||||| || | ||| | | || | | | || | |||||||| |||
Sbjct 134699 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 134642
Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074
||||||| |||||| || || || || | ||| || ||||| || || | |
Sbjct 134641 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 134582
Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134
| ||| | | |||||| | | ||||| | || || | | || |||| || ||
Sbjct 134581 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACCAGGTCCTTCAAGA 134522
Query 118135 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 118194
| || ||||| |||||||| || ||| || | | | ||||| || | |
Sbjct 134521 GCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGG 134462
Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254
| || ||||| ||||| || || || |||| ||| || | || ||| || ||||| |
Sbjct 134461 TATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAG 134402
Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314
| || | || | |||||| || | ||| | ||| ||| | || || | ||||
Sbjct 134401 GGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTCTCCC 134342
Query 118315 AGTCGTA---GTTG-AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
|||| | || | || | || | | | |||||||||||||||||||||||| |
Sbjct 134341 AGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCA 134286
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAG 118427
|| ||||| || |||| || | || || ||||| ||| || | || | |||
Sbjct 134285 GATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCACCGAG 134226
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487
|| | | || ||||| || || || ||||| || | |||| | |||
Sbjct 134225 GCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCC 134169
Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547
||| ||| || || | | || | || |||| || ||||| |||||||||
Sbjct 134168 TCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCG 134109
Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG---GGATAAAAA 118604
| ||||| || || || | ||| || || || || ||| | | || ||
Sbjct 134108 ACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGTAGTGG 134052
Query 118605 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 118664
|| ||||||| | | || | || | |||||||| ||||| || || |||||
Sbjct 134051 TTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTC 133992
Query 118665 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGC 118720
| | | || | | || ||| | | | || || ||||||| || | ||| ||
Sbjct 133991 TGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAATGATGC 133936
Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780
||||| || |||| | |||||| | || |||||| || || || ||||| | |||
Sbjct 133935 GAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTT 133876
Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 118840
||||| ||||||||||| |||||| || || || ||| || ||||||||
Sbjct 133875 GGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTA 133816
Query 118841 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 118899
|||||| | || | || || || || || | || | || || | ||| | | || |
Sbjct 133815 GAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTG 133756
Query 118900 CAGCTGGCACAGTGGCGTTGG---CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956
|| || ||| ||| || || | | ||| ||||| ||| || |
Sbjct 133755 GGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCT 133700
Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016
| ||||| ||||| | || | ||||| || || || ||||| | ||||| ||
Sbjct 133699 CGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCC 133640
Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076
| | || || ||| || ||||||||||| || || |||||||| || ||| |||| |
Sbjct 133639 AGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACA 133580
Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136
|| ||| ||| |||||||| | || || || |||| ||||| || || | |
Sbjct 133579 AGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAA 133520
Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAG 119190
|| |||||||| || || ||||| | |||| | || ||| | | ||
Sbjct 133519 CGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTT--GTTG-CCGC 133463
Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250
|||||| || || | |||||| ||| || ||||| ||||| ||||||| ||||| ||
Sbjct 133462 CCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGG 133403
Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310
| ||| || || || ||| ||| |||| | || ||| | || | ||
Sbjct 133402 AGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGAC 133343
Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370
| || || |||||| ||| ||||| || || | |||| || ||||||| || |
Sbjct 133342 CGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGT 133283
Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430
|||| ||| |||| | | | ||||||||| |||| |||||| || ||||
Sbjct 133282 CGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTAC 133223
Query 119431 CAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTA 119488
| || ||||| || ||||||| ||||| |||||| |||| |||||| || |||
Sbjct 133222 CCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGTTGTA 133165
Query 119489 GGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
|||||||| ||| || | ||||| || || || |||| | ||| ||||| | ||
Sbjct 133164 GGTCTCCAGGACACGCTCG-ATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCA 133106
Query 119548 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 119593
||| || ||| || | | | ||||||| | || |||||||
Sbjct 133105 TGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 133060
>seq112
Length=604763
Score = 100 bits (110), Expect = 4e-16
Identities = 300/456 (66%), Gaps = 14/456 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || ||||| ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 339954 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 339895
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| || || |||| | || | |||| || |||||
Sbjct 339894 AAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG-CCAAGTGCCACAAGAAGACG 339836
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | || |||| ||||| | ||| || |||||||| || | || ||
Sbjct 339835 GTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCA 339776
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| ||| ||| |||| ||||| || | ||| | |
Sbjct 339775 AGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCTCACG 339716
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAA-----AGTCTTGAAGAGTTCCACGGCAAAC 130021
|||| ||| | ||| | || || ||| ||| | | ||| || ||| ||
Sbjct 339715 AATGATCTGCTTGCTGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGA----CA-GGCGAAG 339661
Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081
|| ||| || ||||| ||||| || ||||| || || ||||| || || ||||||
Sbjct 339660 TCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATG 339601
Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140
||||| |||||||| | |||||| || | | | ||| | ||| |||||| || |||||
Sbjct 339600 AGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTC 339542
Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176
|| ||||| |||| ||||||| ||||| ||
Sbjct 339541 AACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGA 339506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618429966492120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |