Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq112 114 2e-20 >seq112 Length=604763 Score = 114 bits (126), Expect = 2e-20 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791 ||||||| || || | |||||| || ||||||||||| |||| | | |||| | Sbjct 339444 CAGTTCCTTGCATCCGAAAGAAGGCCGATTGGGCTATTCGGTGGATCCAGGACAAGAACT 339503 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | | | ||||| |||| || | || || || ||||||||||| |||||| |||| Sbjct 339504 CAT-CTTTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGT 339562 Query 94852 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 | ||| ||| | || | |||||||||||||| ||||||||||| || | ||||| Sbjct 339563 GCTTTC-GCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTC 339621 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||||| || |||||||| ||||| || ||| Sbjct 339622 CAACGAGCTCATTTCTCGTGATGAGGGCCTGCAC 339655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255864155480