Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq24 399 2e-106 seq112 118 1e-21 >seq24 Length=306188 Score = 399 bits (442), Expect = 2e-106 Identities = 1146/1741 (66%), Gaps = 61/1741 (4%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| ||||||||||| |||||| || | |||||| || | | |||| Sbjct 134813 TAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTGATCTTG 134754 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | |||| | |||| ||||||||| ||||| ||||| |||||| | ||||| Sbjct 134753 CCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAGGCACCA 134694 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 || ||||| | ||| | || |||| ||| | ||||||||| | ||| ||| | Sbjct 134693 CGATCGGCGGACATTTGGAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGAGC 134634 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGG-CTCGCACA--A 78433 | ||| | || ||| | |||| || | | || | | | |||| ||| | | | Sbjct 134633 GACTTAATGTCGTCCGGAATGTT-AGGGAT-GTTCTGGATAGAACCGTTCTCAGAAATGA 134576 Query 78434 TTTCATTCTTAATTTGAGGGTTCC-------AGCGATTGATCTTCTGAAGATCCCGGACC 78486 | ||||| || || ||| ||| | |||| | || ||| | Sbjct 134575 TGCGGTTCTTCAT----GGCATCCGACCACAAGCCCAT-ATCTACC--AGGTCCTT---C 134526 Query 78487 AGGTGCC---GGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543 | | ||| |||||| | |||||| || || ||| |||||| |||||||||| Sbjct 134525 AAGAGCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTC 134466 Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603 | || || |||||||| ||||| || |||| |||||| | || ||| || ||| Sbjct 134465 GAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGC 134406 Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG--- 78660 || || |||| || | || |||| ||| ||| ||| | || | ||| Sbjct 134405 ATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTC 134346 Query 78661 ---CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCG 78717 | |||||||| || | | | |||||| || || ||||||||||| Sbjct 134345 TCCCAGTCCCAAAGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCA 134286 Query 78718 GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT-GA 78776 || || || || |||||||| | ||||| ||||||||||| ||||||| ||| || Sbjct 134285 GATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTT-GCACCGA 134227 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | || || |||||||| | | ||| ||||| |||||| | ||| || |||| Sbjct 134226 GGCCGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTC 134167 Query 78837 GGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGAT 78896 || ||||| | | || || || |||| |||| || || |||||||| |||| Sbjct 134166 GGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGAC 134107 Query 78897 AGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCG 78956 | | || |||||||| ||||||||||| || |||||| | | | ||||| ||| Sbjct 134106 ACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTAGTGGTTGAC 134047 Query 78957 ATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAA 79016 ||||| | ||||| ||| || ||| ||| | || ||||||| | || ||| Sbjct 134046 GTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAA 133987 Query 79017 ATCAAAAT-GATTTCCTTTGA-TGAAAGTCGGTAGGCACAGC----GATGCCAGGTTGCA 79070 || | | || || | | || || ||||| ||| ||||| || ||||| Sbjct 133986 GTCGTAGCAGCCCTCGTTGTAGTCAACAAAGGAAGGCAGAGCCAATGATGCGAGATTGCA 133927 Query 79071 CACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT 79130 || || ||| || || | | ||||||||| || ||||| | || || ||| Sbjct 133926 AACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGA--ACTG 133869 Query 79131 G--ATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATG 79188 |||||||| | ||||||||||||||| || ||| ||| |||||||||| |||| Sbjct 133868 CGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGCATG 133809 Query 79189 TACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGG 79248 | || | ||||| || |||| || | | | | | ||| | | | ||||| Sbjct 133808 AAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTGGGCCTTC 133749 Query 79249 ACAACCTTCTTGTACCGACCCTGTGCGA-------CGTACGTCCGGTACAACTCGTTGAA 79301 | ||||| ||||| | ||| | | ||| || ||||| || | ||| Sbjct 133748 ATGG---TCTTG---CGACCTT-TGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCGAA 133696 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| ||| | || || |||||||| | |||||||| || |||||| Sbjct 133695 CTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGTC 133636 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 ||| |||||| || || |||||| || || ||||||||||||||| ||| | ||| Sbjct 133635 GCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTC 133576 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || || || | ||| |||||| ||||| || | || || | | ||| Sbjct 133575 ACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTC 133516 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| ||||| || || |||||||| | ||| |||||| ||||||||||| Sbjct 133515 GGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTC 133456 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 |||||| || || ||||||||||| || |||||||| || | || || | || | ||| Sbjct 133455 GACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCC 133396 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGC 79660 ||| || ||| || | ||| | || || || | | ||| || || ||||||| Sbjct 133395 GTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGAT-TCGGTGCACGTTGAGACCGATGC 133337 Query 79661 CCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCG 79720 | || | | ||||||||| || || |||||| || |||||||| || ||||| Sbjct 133336 CTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGC 133277 Query 79721 AGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGT 79780 ||| |||||||| | |||||||||||| |||| ||| || | ||||| || | Sbjct 133276 TGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCAT 133217 Query 79781 TGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCT 79840 |||| ||||| || | ||||| ||||| | ||| | ||| || | ||| |||||| Sbjct 133216 TGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCA 133157 Query 79841 TGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGG 79900 ||| ||| || |||||| || ||||||||| ||||| ||||||| | || ||| | Sbjct 133156 GGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCATGTGCTGAG 133097 Query 79901 G 79901 | Sbjct 133096 G 133096 Score = 336 bits (372), Expect = 2e-87 Identities = 939/1420 (66%), Gaps = 38/1420 (3%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | ||||||| ||||| ||||||||| || |||||| || ||| ||| Sbjct 133096 CCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGTGACGACATCGAGCGTGTC 133155 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 | ||||| ||| |||| ||| |||| ||| | ||||| ||||| | || ||||| || Sbjct 133156 CTGGAGACCTACAACCTCATGT-CCAGCAAGCTGTTCACTCACGCTTCACCAACCCTGTT 133214 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 ||| || ||||| | || ||| |||| ||| ||||| || | |||||||| || Sbjct 133215 CAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAAGA 133274 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 |||||| || || |||||||| || |||||| || || ||||||||| | | || Sbjct 133275 CAGCATCGACGGTATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCAGG 133334 Query 19342 GGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400 || ||||| || || ||| | | ||||| | | || | || || || | Sbjct 133335 AGGCATCGGTCTCAACGTGCACCGA-ATCCGTGCCACCGGCTCTTACATTGCCGGTACCA 133393 Query 19401 ACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 |||| || | ||| || | || |||||||| |||||||||||||| || | |||| Sbjct 133394 ACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAACACTGCTCGATACG 133453 Query 19461 TCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 || ||||||| ||| ||| || || | |||||||| ||||| ||||| ||||||| Sbjct 133454 TCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTGGCACG 133513 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | ||||| | || ||| | || |||||| |||||| || | || || ||| || Sbjct 133514 CCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGAAGAAGCCCGCGCTC 133573 Query 19581 GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACG 19640 | ||| | ||| |||| ||||||| || || || |||||| || || |||||| ||| Sbjct 133574 GTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCGAGAAGAACG 133633 Query 19641 AAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGG 19700 || ||| || |||||||| | || ||||| || || | || |||||| || | Sbjct 133634 GCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCTTGCTGATTGCTACGGTGATG 133693 Query 19701 CGTTCAATGAGTTGTACCGGACTTACGTAGCCCAG---GGC--CGGT-TCAAGAAGGTGG 19754 |||| | || ||||| || || | || ||| ||| ||| ||||| || Sbjct 133694 AGTTCGAGAAGCTGTACGAGAAGTATG-AG--CAGGCTGGCAAAGGTCGCAAGACCATG- 133749 Query 19755 TCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGT 19814 ||||| | | | ||| | | || | | ||| ||| ||||||| || | Sbjct 133750 --AAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGCTCAGACCGAAACCGGCAACCCTT 133807 Query 19815 ACATGTGCTACAAGGAC-GCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGAT- 19872 |||| |||||||||| || || | || || | || ||||||||| | ||| | || Sbjct 133808 TCATGCTCTACAAGGACAGCTGCAACCGTAAAAGC-AACCAGAAGAACCTGGGCACCATT 133866 Query 19873 -CAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCG 19931 ||| |||||||| || ||||| ||||| ||| | || || ||| || | Sbjct 133867 CGCAGT--TCCAACCTTTGCACTGAGATCATCGAGTACTGTGCTCCCGATGAGGTCGCTG 133924 Query 19932 TGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCG 19985 | || ||||| || || || ||||| | || || ||| | || || || Sbjct 133925 TTTGCAATCTCGCATCATTGGCTCTGCCTTCCTTTGTTGACTACAACGAGGGCTGCTACG 133984 Query 19986 ACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCG 20045 |||| || | ||||||| || | ||| ||| || || |||| | |||| Sbjct 133985 ACTTCCAGAAGCTACACGAGGTCACACAGGTTGTCGTCCGCAACTTGAACAAGATTATCG 134044 Query 20046 ATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCG 20105 | ||| ||||| | | | ||| ||||| || ||||| ||||| || || | Sbjct 134045 ACGTCAACCACTACCCCATCATCGAGGCCCGCAACAGCAACATGCGTCACCGACCCATTG 134104 Query 20106 CGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATC 20165 |||| |||||||| || || || | ||| || || || | | ||||| | Sbjct 134105 GTGTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCTTCGCATGCCCTTCGAGTCCC 134164 Query 20166 CCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGG 20225 || |||| || ||| | |||||| ||||| ||| || | |||||||| || | || Sbjct 134165 CCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAGACCATTTACCACGCTGCTTTGACGG 134224 Query 20226 AATC-GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCG 20284 || |||| ||||||| || ||||| || || ||| | |||||||| || || || Sbjct 134225 CCTCGGTGC-AACTCGCTAAGGAGGAGGGTCCTTACTCTAGCTTCAAGGGTTCCCCAGCA 134283 Query 20285 TCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGT----CACTGAGA---ATGAGTTTTG 20337 || ||||||||||||||| || |||||| ||| | || || || | | | Sbjct 134284 TCTGAGGGTATCCTCCAGTTTGATATGTGGAACGTGAAGCCCTCCGACCTTTGGGACTGG 134343 Query 20338 GAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCC 20397 ||| |||| | || | ||| ||||| |||||||| ||||| |||| || Sbjct 134344 GAG-ACCCTTCGCGAGCAGGTTAAGGAGCACGGTATTCGCAACAGCTTGCTTCTCGCCCC 134402 Query 20398 CATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACAC 20457 ||||| || ||| || | |||||| |||| || ||||| |||||||| || || Sbjct 134403 TATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAATAACGAATGCTTCGAGCCTTATAC 134462 Query 20458 GACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 | ||||||||| ||| ||| || || ||||||||| Sbjct 134463 CTCGAACATCTACCAGCGCCGTGTCCTTGCTGGTGAGTTC 134502 >seq112 Length=604763 Score = 118 bits (130), Expect = 1e-21 Identities = 312/462 (68%), Gaps = 22/462 (5%) Strand=Plus/Plus Query 59968 CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCT 60027 |||| ||||| || ||||| | ||||| || ||| || || || |||||| ||| Sbjct 339504 CATCTTTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGTG 339563 Query 60028 CGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCA 60087 | ||| | || ||||||||||| |||||||| |||||||| ||| ||| ||||||| Sbjct 339564 CTTTCGCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCA 339623 Query 60088 ACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCAC 60147 ||||||| ||||| || || |||||||| || || || || || | | ||| ||| Sbjct 339624 ACGAGCTCATTTCTCGTGATGAGGGCCTGCACACCGACTTCGC-CTGTCTC-CTA--CAC 339679 Query 60148 AC-CTATTGGAAAAATGCCCTTCCAAG--GAT-ATTCACAAGATTGTTCAGTGGGCTTGT 60203 | | ||| | || | | |||| ||| |||| ||| | ||| | ||| Sbjct 339680 TCTCACTTGAAGAACCGAGCCAGCAAGCAGATCATTCGTGAGA-TCATCACCGACGCTGT 339738 Query 60204 GAA-GTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGC 60262 || | ||| |||||| | || || || || || ||| || | || ||| || | Sbjct 339739 CAACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCTTGCGCTCTTCTGGGCATGAACTC 339798 Query 60263 TGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCG-CCTCATGGCCCAGTTTG--- 60318 | |||| ||| ||||| ||||||| || ||||| | || || || || | Sbjct 339799 GGACCTCATGAAGCAATACATCGAGTTTGTTGCCGACCGTCTTCTTGTGGCACTTGGCAA 339858 Query 60319 -GAGAAGGACCAATTTAC-GGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTT 60376 |||||| |||||| | || ||||| ||||||| ||||||| |||||| | Sbjct 339859 CGAGAAG-----ATTTACAAGTCTG-CCAACCCCTTCGACTTCATGGAGAACATCTCCCT 339912 Query 60377 GGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 | || |||||||||||||| |||||||| || || ||||| Sbjct 339913 TGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 339954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520158108880