Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq100 140 4e-28 >seq100 Length=149193 Score = 140 bits (154), Expect = 4e-28 Identities = 194/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||| ||||||||||||||||| |||||| |||| | | || ||||| |||| || || Sbjct 125479 GAGTTGGTCCACGCCCTGCCCGGTGTAATCGGTCTCGCAATCGACGTATTCGGCGCCAAA 125420 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 ||||| ||| ||||| || || ||||| || ||||| || | | ||| || || Sbjct 125419 GTGCCGCCATTGGAAACCATATACGGGACCTAGGTCACCTTCTTTGCGGTGGGAAAGACC 125360 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGA 146174 | | | |||||||| | ||||| ||||| | |||||||| ||||| ||| ||||| Sbjct 125359 GAGCATGTCGAGGAAGGCGCGGGATCCGTTACCATCCCAGATTTTGACTCCCTGGGCGGA 125300 Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234 |||| ||||| || || | |||||||||||| ||||| |||||| | | Sbjct 125299 GAGCGTGGTGGAGGAGGTCGAGGCGGAGATGAACCAGAGGAGCTCGAGGAGGACGGCTTT 125240 Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||||| |||||| || || || |||| Sbjct 125239 GGTGAAGACCCGCTTGGTCGTAAGGAGCGGGA 125208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074159406320