Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq118 113 4e-20 >seq118 Length=126874 Score = 113 bits (124), Expect = 4e-20 Identities = 179/255 (70%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 5501 ACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCT 5560 ||||| || |||||| ||||| |||||||| | | || ||||| | || || Sbjct 98150 ACGCCTGTACTCCCGAACCCGCCCGCGCCTCTGACGCTCTCCTCCAGCTGTTCGACTTCG 98209 Query 5561 TCCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTT 5620 |||| |||||| ||| ||| | ||||||||| | || |||||| || Sbjct 98210 ACCACCTCGGGGGTATAGATGCGTTCGAGAACCAGCTGCGCGACGCGATCGCCCTCGTTG 98269 Query 5621 ACCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGT 5678 || | || || || |||| ||||||||| | || || | ||||||||||| Sbjct 98270 ACGACAAAGTCCACGT--CCGAGTGGTTGAACAGGAGAACCTTGACTTGGCCGCGGTAGT 98327 Query 5679 CGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGG 5738 ||||||| || ||||| ||||| ||||| ||||||| |||| | || ||||||||||||| Sbjct 98328 CGGCGTCGATGACGCCGGCGCCAACGTCAATGAAGTTCTTGGCTGCTAGGCCGGAGCGGG 98387 Query 5739 GAGCCACGCGGCCGT 5753 | || | |||||||| Sbjct 98388 GGGCGATGCGGCCGT 98402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052523618896