Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq18 100 2e-16 >seq18 Length=383124 Score = 100 bits (110), Expect = 2e-16 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||||||||| || || || |||||||| ||||| | | | | ||||||| Sbjct 57436 AACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTC 57377 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC--A 15084 | || ||||| ||| | || | |||||| || ||| ||||| || |||||||| Sbjct 57376 AAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTG 57317 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 | |||||| || || | || ||||| ||| ||| || || | ||| ||||| Sbjct 57316 GATCTTTTGC--TTGACGTTGTCGATAGTGTCGGACGATTCCACCTCAAGGGTGATGGTC 57259 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || ||||||||| Sbjct 57258 TTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 57226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357390440654030