Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq18 86.0 1e-11 >seq18 Length=383124 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || |||| |||| || ||| || ||| || |||||| Sbjct 57684 ATACCACCACGAAGACGGAGCACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCG 57625 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || | || ||||| || ||||| | | ||| |||||||| Sbjct 57624 GAGAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGATCAGGT 57565 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || || || || || |||| || || || |||||||||||| Sbjct 57564 GGGATACCCTCCTTGTCCTGGATCTTTTGCTTTACGTTGTCGATGGTGTCGGAAGACTCA 57505 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || ||||| || || || || ||||| Sbjct 57504 ACCTCGAGAGTAATCGTCTTGCCGGTAAGCGTCTTAACGAAAATCTGCAT 57455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650374046560