Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq18 89.7 1e-12 >seq18 Length=383124 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || |||||||| | || || |||| ||||| || |||||||||||||| | | | Sbjct 57864 ATGTTGTAATCAGAGAGGGTCCGGCCATCCTCCAACTGCTTACCAGCAAAGATCAGACGC 57805 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || ||||| || || || || || || || || || | || || ||| || | | Sbjct 57804 TGCTGGTCAGGCGGGATACCCTCCTTGTCCTGGATCTTTTGCTTCACGTTATCAATCGTA 57745 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || || || ||||| || ||||| || || || || || || || | || |||||| Sbjct 57744 TCCGAAGACTCGACTTCCAGCGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAAATCTGC 57685 Query 192535 AT 192536 || Sbjct 57684 AT 57683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475484313300