Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq15 109 5e-19 >seq15 Length=408871 Score = 109 bits (120), Expect = 5e-19 Identities = 183/264 (69%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| ||||| ||||| || || ||||| | ||| ||| |||||||||||| Sbjct 3593 ACAAACTTGGCAATGAAGCCATCGAGAAGATCCTGGAGCTTGGCGGCCTCGTGGGAGCCG 3534 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || || | ||| | | ||||| || || |||||| | || Sbjct 3533 TTGATGATCCAGCGGTCATCAGGAGGATCAATGTTGGTTTGAGCACCAAGCTCGAAACCA 3474 Query 34471 AAGTACTTTGTCGGGTAAATGGCC----GGACGTCCAAGCGCCTTGGCGATTTCGGGCAT 34526 |||||||| || |||| ||| ||||| | || | || ||| | | | Sbjct 3473 AAGTACTTGATC----AAATAGCCACCGGGACGAGCCAGGGACTGGGCAACGCTGCTGAG 3418 Query 34527 GTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGG 34586 |||||| | ||| |||||||| ||||| ||||| ||||| | ||||| ||| ||| Sbjct 3417 GTTGACAACGACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGGATACGCTC 3358 Query 34587 CATTTTGTAGCGGTAGAACGCGTC 34610 ||| |||||||||||||| | ||| Sbjct 3357 CATCTTGTAGCGGTAGAAGGGGTC 3334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839798720494