Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 1e-14 >seq18 Length=383124 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| ||| | || ||||| ||||| ||| | || ||| | | Sbjct 57227 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAATCGTCC 57286 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || || |||||||| || || || ||| | || |||||| Sbjct 57287 GACACTATCGACAACGTCAAGCAAAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCAG 57346 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| || || || ||||| || |||| | || || ||||||||| Sbjct 57347 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACTTTGAGCGACTACAAC 57406 Query 107736 ATTCAAAAGGAGTCTAC 107752 ||||| ||||||||||| Sbjct 57407 ATTCAGAAGGAGTCTAC 57423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875059650662