Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq14 109 2e-18 >seq14 Length=412804 Score = 109 bits (120), Expect = 2e-18 Identities = 124/163 (76%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || |||||||| ||||||||||| |||||||||||| ||| || Sbjct 94923 CTCGATCAAATGGGCAATTGTCATACGCGAAGGAATGGCGTGAGGGTTGATGATAATATC 94982 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAA 309802 ||| | || || | | | | || |||||||| |||| | |||| | | | ||||| Sbjct 94983 AGGCGTGATACCCTCG---GCGGTAAACGGCATATCCTCTTGACGGTA-AGTAACACCAA 95038 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 | || ||||||||| |||| | || |||||||| |||||||| Sbjct 95039 TGGTACCCTTTTGACCGTGACGAGACGCAAACTTATCACCAAT 95081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951965446537424