Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq18 100 3e-16 >seq18 Length=383124 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| || ||||||||||||||||||| || || ||||| Sbjct 57436 AACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTC 57377 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || |||| | || |||||||| ||||| ||||| ||||| || || || Sbjct 57376 AAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCCTCCTTGTCTTG 57317 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || ||||| || | | || | ||| |||| || ||||| || | || | || || Sbjct 57316 GATCTTTTGCTTGACGTTGTCGATAGTGTCGGACGATTCCACCTCAAGGGTGATGGTCTT 57257 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || | ||| || ||||| Sbjct 57256 GCCGGTAAGAGTCTTGACGAAGATTTGCAT 57227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609067164880