Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq100 96.9 4e-15 >seq100 Length=149193 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 || |||||||||||||| || ||| | ||| |||| || ||||| ||| |||||| Sbjct 125478 AGTTGGTCCACGCCCTGCCCGGTGTAATCGGTCTCGCAATCGACGTATTCGGCGCCAAAG 125419 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 |||| ||| ||||| || || || || || ||||| || || | ||| || ||| || Sbjct 125418 TGCCGCCATTGGAAACCATATACGGGACCTAGGTCACCTTCTTTGCGGTGGGA-AAGACC 125360 Query 147352 G-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410 | | | ||| || || |||| |||| | |||||||| ||||||| |||||| Sbjct 125359 GAGCATGTCGAGGAAGGCGCGGGATCCGTTACCATCCCAGATTTTGACTCCCTGGGCGGA 125300 Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 |||| | ||| || ||| | |||||||||||| ||||| Sbjct 125299 GAGCGTGGTGGAGGAGGTCGAGGCGGAGATGAACCAGAGGAGCTC 125255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485388891200