Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq100 86.0 5e-12 >seq100 Length=149193 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 111721 TGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCA 111780 || || | ||| ||||||||||| || ||| |||| |||| || ||| |||| || Sbjct 125865 TGGTTGAGATAGACATGCGCATCGCCCATAACATGGGTCAAGCTCCCCGGCACCAAGTCA 125806 Query 111781 GTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCT 111840 | ||| || | ||||| || || || ||| || ||||||||||| |||||||| Sbjct 125805 CACACGTGCGCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCAATGTTAAAGGGCACACCC 125746 Query 111841 AGGCCCATATCTCCCGATCTTTGATATAGCTGACA 111875 || ||||| || | ||| |||||||| | ||| || Sbjct 125745 AGTCCCATGTCACACGACCTTTGATACAACTGGCA 125711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391943889892354