Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq244 93.3 4e-14 >seq244 Length=165466 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 ||| | || || || |||||||| || |||| | || ||||| ||||||||||| Sbjct 56619 TCGCTGATGTATGTGTCGATGAGAAGCGAGTACGTCTCAGAGTGGATGTTCTCCATCATG 56678 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 |||||||| ||||| ||||| || || || | | ||| ||||| || |||||| || Sbjct 56679 ATCTGAAAGCCGTAGAAGCAACGCGCCTCGGGGACTTGTACTTCGCCGCTGAATCGCTCG 56738 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | | ||| ||||| || ||||| ||| |||||||| || || Sbjct 56739 ACCAAATTCTCGTTGACAATGCCATCGGATGCGGCGAAGAAGGC 56782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542850539000