Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq164 91.5 3e-13
>seq164
Length=316633
Score = 91.5 bits (100), Expect = 3e-13
Identities = 218/325 (67%), Gaps = 16/325 (5%)
Strand=Plus/Minus
Query 248824 TTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTG 248883
||||| | |||||| || || || ||| || || |||| ||| |||||||| | |
Sbjct 150687 TTCTTCGGTTTCAAGACCCTTGAACGATCATACCTGCTCAGAATCAATGGCAAGGTTGCT 150628
Query 248884 GAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAG 248943
||||| ||| |||||| | ||||| || ||||| || |||||| || ||||| |||
Sbjct 150627 GAACGTCCTCAACACATGCTTATGCGTGTAGCTGTAGGCATTCACGGCGAAGACATTGAG 150568
Query 248944 AGCGTGCTCGAGACGTACACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCG 249000
|| | ||||||| || | | ||| | || || | ||||||||| | |||
Sbjct 150567 TCCGCGATCGAGACATATAACTACATGTCAAACAAATACT---TCACACATGCCTCGCCG 150511
Query 249001 ACGCTCTTCAACGCCGGTA--CCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCA 249058
|| ||||||||||| || | |||||| || || || ||| ||||| || | | ||
Sbjct 150510 ACCCTCTTCAACGCAGGCACCCCGTCACCA--CAAATGTCCTCTTGCTTCCTCATCGACA 150453
Query 249059 TGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGATTT 249115
| | || || | || || || |||||||| || | |||| || | |||||
Sbjct 150452 TCAAGGATGATAGCATTGAAGGTATCTATGACACCCTGA---AGACTTGTGCCATGATTT 150396
Query 249116 CTAAATTCGCGGGCGGAATCGGTCT 249140
| || || ||||| || |||||
Sbjct 150395 CCAAGACTGCTGGCGGTATTGGTCT 150371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073760553006400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |