Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 2e-16
>seq9
Length=355999
Score = 100 bits (110), Expect = 2e-16
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCG 45184
||||||||||| || |||||| || ||||||||||| ||| | ||| ||| |||
Sbjct 44966 ACCAAGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCTGACAGAGTTCGGCCATCCTCG 45025
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || |||||||| || ||||| ||||| || || || || | |||||| ||||||
Sbjct 45026 ---AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGCGGGATACCCTCTTTGTCC 45082
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| ||| || || | | | | ||| ||| ||||| | || || |||
Sbjct 45083 TGAATCTTTGATTTTACGTTGTCGATGGTATCCGATGACTCGACCTCAAGAGTGATGGTC 45142
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || || ||||| || |||||||||||
Sbjct 45143 TTGCCAGTGAGTGTCTTGACGAAGATTTGCAT 45174
Score = 96.9 bits (106), Expect = 3e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| |||||||||||| || ||| | || |||||||| || || |||||
Sbjct 45212 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCCAGTTGCTTACCAGCGAAG 45271
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAAC 45261
||||| ||||||||||| ||||| | |||||||||||| ||||||| ||| ||
Sbjct 45272 ATCAATCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATTTTTGACTTCAC 45327
Score = 89.7 bits (98), Expect = 4e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| |||||||||||| ||| |||| |||| || || || || || |||||
Sbjct 45495 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCTGCGAAG 45554
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||| ||||||||||| || || | |||||||||||| |||||
Sbjct 45555 ATCAAGCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATTTT 45601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073153633925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |