Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq164 120 6e-22 >seq164 Length=316633 Score = 120 bits (132), Expect = 6e-22 Identities = 176/249 (71%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || |||||||||||||| || || || ||| || || ||||| ||||| |||||| Sbjct 150380 CCGCCAGCAGTCTTGGAAATCATGGCACAAGTCTTCAGGGTGTCATAGATACCTTCAATG 150439 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 |||||||| | | | | | |||||||| ||||| | ||| |||| || || Sbjct 150440 CTATCATCCTTGATGTCGATGAGGAAGCAAGAGGACATTTGTGGTGACGGGGTGCCTGCG 150499 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || || || || || ||||| || || || | | |||||| | |||||| || Sbjct 150500 TTGAAGAGGGTCGGCGAGGCATGTGTGAAGTATTTGTTTGACATGTAGTTATATGTCTCG 150559 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 || | || | |||||| ||||||||||| ||||| |||||||||| ||||| ||| Sbjct 150560 ATCGCGGACTCAATGTCTTCGCCGTGAATGCCTACAGCTACACGCATAAGCATGTGTTGA 150619 Query 95032 GGGCGCTCA 95040 || || ||| Sbjct 150620 GGACGTTCA 150628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578611405875