Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq9 122 2e-22 >seq9 Length=355999 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || ||||| || ||||||| || || || || || ||||| Sbjct 44978 GTTGACTCCTTTTGGATGTTGTAGTCTGACAGAGTTCGGCCATCCTCGAGCTGCTTTCCG 45037 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| ||||| || || || || ||||| ||||||||||||| |||| Sbjct 45038 GCAAAGATCAAACGCTGCTGATCCGGCGGGATACCCTCTTTGTCCTGAATCTTTGATTTT 45097 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | || ||||| || || || ||||| ||||| ||||| Sbjct 45098 ACGTTGTCGATGGTATCCGATGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGTGTC 45157 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 45158 TTGACGAAGATTTGCAT 45174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392130275900