Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq9 86.0 5e-12
>seq9
Length=355999
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || || || || ||||||||| |||||||| || | || ||| | |||||
Sbjct 44965 CACCAAGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCTGACAGAGTTCGGCCATCCTC 45024
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||| ||| | | || ||||||||||||||| ||| | || || ||||||
Sbjct 45025 GAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGCGGGATACCCTCTTTGTCCTG 45084
Query 48637 AATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| || || || | | | |||||||| | ||||| ||| | || ||||| |
Sbjct 45085 AATCTT-TGATTTTACGTTGTCGATGGTATCCGATGACTCGACCTCAAGAGTGATGGTCT 45143
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || ||||| || || || || || |||||
Sbjct 45144 TGCCAGTGAGTGTCTTGACGAAGATTTGCAT 45174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249018050425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |