Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq9 131 2e-25
>seq9
Length=355999
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||||||||| ||| || |||||||| | ||| || || || ||| | |
Sbjct 44960 CGCAGCACCAAGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCTGACAGAGTTCGGCCA 45019
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| |||||| ||||||| || | |||||||| || || ||||| ||||||
Sbjct 45020 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGCGGGATACCCTCTTTG 45079
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| |||| || ||| | ||| || || | ||||| |||| ||||||
Sbjct 45080 TCCTGAATCTTTGATTTTACGTTGTCGATGGTATCCGATGACTCGACCTCAAGAGTGATG 45139
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || || || ||||| |||||
Sbjct 45140 GTCTTGCCAGTGAGTGTCTTGACGAAGATTTGCAT 45174
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| |||||||| || | ||| || ||| || ||| | ||||||||| || || ||
Sbjct 45206 GTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCCTCCAGTTGCTTACCA 45265
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| |||| || || ||||||||||| || || ||||| | |||||||| |||
Sbjct 45266 GCGAAGATCAATCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATTTTTGACTTC 45325
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
|| | ||| || |||| | ||||| || | |||||||| || || ||
Sbjct 45326 ACATTGTCGATGGTATCAGAGGATTCGACTTCGAGGGTGATGGTCTTGCCGGT 45378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288818453000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |