Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq164 325 1e-83
>seq164
Length=316633
Score = 325 bits (360), Expect = 1e-83
Identities = 1196/1857 (64%), Gaps = 91/1857 (5%)
Strand=Plus/Minus
Query 363373 GATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTAT 363431
||| || | ||| | | ||||| | ||||| | || ||| ||||| ||| | ||
Sbjct 150702 GATTTCAACTATCAGTTCTTCGGTTTCAAGACCCTTGAACGATCATACCTG-CTCAGAAT 150644
Query 363432 CAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCA 363491
|||||| | ||| |||||| || || || ||| | |||||||| ||| | || || ||
Sbjct 150643 CAATGGCAAGGTTGCTGAACGTCCTCAACACATGCTTATGCGTGTAGCTGTAGGCATTCA 150584
Query 363492 TTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTC 363549
|| || |||| ||||||| || |||||||| || | | || | || |||
Sbjct 150583 CGGCGAAGACATTGAGTCCGCGATCGAGACATATAA-CTAC-ATGTCAAACAAATACTTC 150526
Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTC-GTAATCCACAGATGTCTTCTTG 363608
|| || ||| |||| || | | ||| || || || | || | ||||| ||||| |||||
Sbjct 150525 ACACATGCCTCGCCGACCCTCTTCAACGCAGGCACCCCGTCA-CCACAAATGTCCTCTTG 150467
Query 363609 CTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTG 363668
||| || | | || ||||| ||| ||| || ||||||| |||||| || |||| |||
Sbjct 150466 CTTCCTCATCGACATCAAGGATGATAGCATTGAAGGTATCTATGACACCCTGAAGACTTG 150407
Query 363669 TGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-AC 363727
||| | |||||||||| ||| ||||| |||||| | | || | | || || ||
Sbjct 150406 TGCCATGATTTCCAAGACTGCTGGCGGTATTGGTCTGAATGTGCATCGTATCCGCGCTAC 150347
Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787
| | || ||| |||| || || ||| ||||| || | |||||||| || |
Sbjct 150346 TGG-CTCCTATATTGGCGGAACCAATGGTACCTCCAATGGTCTCATCCCCATGCTCCGCG 150288
Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847
| | |||| ||||| | |||||||| |||||||| ||||| || || || |
Sbjct 150287 TCTACAACAACACTGCACGATACGTCGATCAGGGTGGGAATAAGCGTCCGGGTGCCTTCG 150228
Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-C 363906
| || ||||||||||| || ||||| |||| | || ||||| || ||||||| |
Sbjct 150227 CCATCTATCTCGAGCCATGGCACGCCGACGTTTTCGGCTTCCTTGATCTAAGGAAAAATC 150168
Query 363907 ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
| || || |||||| | ||||| || || ||||||| ||||| ||| | | |||
Sbjct 150167 ATGGTAAGGAAGAGG---TCCGTGCTCGCGACTTGTTCTACGCACTATGGATCCCCGACT 150111
Query 363965 ATTTTATGAAGCGCGTG---GAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAAT 364021
|| |||||||| || ||| || |||| || | || || ||||| |||||
Sbjct 150110 TGTTCATGAAGCGTGTCCAAGAGAACGGC--GAAT-GGACTCTGTTCTGCCCCAACGAAG 150054
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGT------ 364075
||| || || |||| || | ||||| || | || | || ||| | ||||
Sbjct 150053 CTCCTGGCCTCGCCGACGTTTATGGTGATGAGTTTGAGGAACTCTACCACAAGTGAGTCA 149994
Query 364076 ------------------------ATGA-------------ATCGGAGGGA-AAGGCT-- 364095
|||| || ||| | |||||
Sbjct 149993 AACGAGTACAAACGTTTCACTCCAATGACTGACATTCCCAGATACGAGCGTGAAGGCCGT 149934
Query 364096 ---CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152
||| | ||| ||| || |||||||| |||| ||| ||| | || || |||| ||||
Sbjct 149933 GGGCGTGAAACAGTTCGTGCCCAGAAGCTGTGGTATGCAATCCTAGAGTCCCAGACTGAG 149874
Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212
|| |||| || |||||| | ||||| ||| | |||||||||||| ||||||| || ||
Sbjct 149873 ACTGGAAACCCATATATGCTCTACAAGGATGCATGCAACCGCAAGAGCAACCAGAAGAAC 149814
Query 364213 CTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271
| || || || | |||| | ||||| || || ||||| ||||| ||||||||||| ||
Sbjct 149813 TTGGGAACTATCC-GCAGTTCTAACCTCTGCACTGAGATCATTGAGTACACCGCTCCAGA 149755
Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTAC 364331
||| || ||||| ||| | | || | || || || || || || | || |
Sbjct 149754 TGAGGTCGCGGTATGCAACTTGGGCTCTCTTGCTCTACCCGCTTTCGTCGACTATCATCG 149695
Query 364332 T------TTTGACCACCAGCATCTTTATGACGTAACCTATCA--TGCT-ACTTGCAATCT 364382
| | ||| |||| | || | || || || ||| |||| ||| |||| ||
Sbjct 149694 TGGCGAATATGATTTCCAGAAGCTCCACGAGGTCAC---TCAGGTGCTCACTCGCAACCT 149638
Query 364383 CGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCG 364442
|||| | ||||| ||| | || || | || || || ||| | |
Sbjct 149637 AAACAAAATCATCGAAGTAAATCACTACCCCGTCGAAGAGGCACGCCGCAGCAATTTCAG 149578
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502
|| || || || || || ||||| || || |||||||| | || | ||| ||
Sbjct 149577 GCACCGACCTATCGGCCTCGGTGTCCAAGGTCTCGCTGATGCATTCCTTGCCCTCCGCAT 149518
Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562
| | |||||||| || || ||| | || || | ||||||||||||| || ||
Sbjct 149517 GCCCTTTGATTCTCCAGAGGCTAGGAAGCTCAACACTCAGATCTTTGAAACCATTTACCA 149458
Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622
||| || | ||||| || || || | | || || || | || || ||
Sbjct 149457 TGCTGCCCTCACTGCATCCTGCGAGATTTCTAAGGAGCTTGGTCCTTATGCCACCTACGA 149398
Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682
|| || || | || || || | || || | || | ||||| ||||| || |||
Sbjct 149397 AGGTTCTCCCGTGTCCCAAGGTATCTTGCAATACGACATGTGGAACGTCACCCCTACTGA 149338
Query 364683 CCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCT 364742
| ||| |||||||| | | ||||| || |||||||| || ||||| ||
Sbjct 149337 TCTTTGGGACTGGGATTCATTGAAGGCCAACATTGCTCAGCATGGTGTGCGAAACTCGCT 149278
Query 364743 CGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTT 364802
| || || || ||||| |||||||| || | ||||| ||||||||||||||||||||
Sbjct 149277 CCTTGTTGCCCCTATGCCAACGGCTTCCACCTCTCAGATTCTCGGAAACAACGAGTGCTT 149218
Query 364803 CGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGT 364862
|| || | ||| || |||| || ||||| || | |||| || || | || ||
Sbjct 149217 TGAGCCATATACCTCAAACATTTACTCTCGCCGTGTCTTGGCCGGTGAGTTCCAAGTTGT 149158
Query 364863 TAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAA 364922
||| | || | ||||| ||| || || |||||| |||| |||||||||
Sbjct 149157 AAATCCATGGCTGTTGAAGGACCTTGTAGATATGGGTCTGTGGTCGGACAACATGAAGAA 149098
Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982
| ||||| || | |||||| | |||| ||||| | || || || | ||
Sbjct 149097 CCGAATCATTGCAGAAGGCGGTTCTATTCAGAGGATTCCCAACATCCCTGATGACATCAA 149038
Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG---ATATGGCGGC 365039
| || | ||||| ||||| ||||||||||| | |||| ||||| | ||||| ||
Sbjct 149037 GGCTCTCTACAAGACCGTTTGGGAAATTTCACAGAGAAC---CATTGTCCAAATGGCTGC 148981
Query 365040 CGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAAC 365099
||||| || || || ||| |||| ||| || | ||| | ||||| |||| ||
Sbjct 148980 TGATCGAGGAGCATTCATCGATCAGTCCCAATCACTCAACATCCACATGAAGGAGCCTAC 148921
Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| | ||| ||||||||||||| ||| |||||||| ||||| ||||| ||
Sbjct 148920 CATGGGTAAGATTACATCCATGCACTTCGCTGGGTGGAAGCTTGGTCTCAAGACTGG 148864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303346502832350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |