Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq244 82.4 7e-11
>seq244
Length=165466
Score = 82.4 bits (90), Expect = 7e-11
Identities = 127/179 (71%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651
||| || || || || || || || || || ||||||||| |||| || || || | |||
Sbjct 56017 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCTCCAT 56076
Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711
||| || || ||||| || || | | || | || ||| || | | | ||| ||
Sbjct 56077 AAAGTCAAAGGGATTGGTAGCGTTGTAGAACTTGTTGTTGCCGAGGGCTAAGAGCAGACG 56136
Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTG-CATTCATGCCCAGCATTGCG 104769
|| || ||||| || ||||||| |||||| || ||| |||||||||| |||| ||||
Sbjct 56137 GTCGGCAACAAACTCAATGTACTGGCACAT-GAGGGTGGCATTCATGCCGAGCAGTGCG 56194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429933773065875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |