Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq244 89.7 1e-12
>seq244
Length=165466
Score = 89.7 bits (98), Expect = 1e-12
Identities = 173/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | || |||| ||| | | ||| || | ||||||
Sbjct 56250 ATCATCACTGAGGCCGTCACCATTGAGCAGGAGTTCTTGTCCGAGTCTTTGCCATGCGCA 56191
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | |||||||| | |||||| | |||||||| || || || |||||||| |
Sbjct 56190 CTGCTCGGCATGAATGCCACCCTCATGTGCCAGTACATTGAGTTTGTTGCCGACCGTCTG 56131
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
|| | || || || | | || | |||||| | | || ||||||| ||||||||||
Sbjct 56130 CTCTTAGCCCTCGGCAACAACAAGTTCTACAACGCTACCAATCCCTTTGACTTTATGGAG 56071
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740
||| || || || || || ||||||||||| |||||||| |||| || || | |
Sbjct 56070 AACATCTCCCTGGCGGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 56011
Query 243741 CCCTGGTGTGATG 243753
|| ||||| |||
Sbjct 56010 GCC-GGTGTTATG 55999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873994473750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |