Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq164 190 2e-43
>seq164
Length=316633
Score = 190 bits (210), Expect = 2e-43
Identities = 439/654 (67%), Gaps = 8/654 (1%)
Strand=Plus/Minus
Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792
||||| || || || || ||||| |||| || |||||| |||| | || || ||
Sbjct 150678 TTCAAGACCCTTGAACGATCATACCTGCTCAGAATCAATGGCAAGGTTGCTGAACGTCCT 150619
Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852
|| || |||| ||||| || || | || ||||||||| | ||||| | | |
Sbjct 150618 CAACACATGCTTATGCGTGTAGCTGTAGGCATTCACGGCGAAGACATTGAGTCCGCGATC 150559
Query 93853 CGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCACCCCGACCCTGTTCAA 93911
| | | | ||||| |||| | || |||| || | |||||||| |||||
Sbjct 150558 GAGACATATAACTACATGTCAAACAAATACTTCACACATG-CCTCGCCGACCCTCTTCAA 150500
Query 93912 CGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAAGGCCGACT 93970
||| || |||||| ||||| ||||| || || ||||| || ||| | ||||| ||
Sbjct 150499 CGCAGGCACCCCGTCACCACAAATGTCCTCTTGCTTCCTCATCGAC-ATCAAGGATGATA 150441
Query 93971 CCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGG 94030
||| || || | |||| ||| ||| ||||| | || || || || || |
Sbjct 150440 GCATTGAAGGTATCTATGACACCCTGAAGACTTGTGCCATGATTTCCAAGACTGCTGGCG 150381
Query 94031 GAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATCCGCGGTACCAA 94088
| || || | | ||| || |||| || || | || ||||| || |||| |||||
Sbjct 150380 GTATTGGTCTGAATGTGCAT--CGTATCCGCGCTACTGGCTCCTATATTGGCGGAACCAA 150323
Query 94089 TGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGT 94148
||| |||||||| || ||| |||| |||||||| |||| ||||||| | || || |||||
Sbjct 150322 TGGTACCTCCAATGGTCTCATCCCCATGCTCCGCGTCTACAACAACACTGCACGATACGT 150263
Query 94149 GGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGC 94208
|| |||||||| | | | |||| | ||||| ||||||||||||| ||||||||
Sbjct 150262 CGATCAGGGTGGGAATAAGCGTCCGGGTGCCTTCGCCATCTATCTCGAGCCATGGCACGC 150203
Query 94209 GGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAG 94268
||||| | ||| | || || | || || || || || || || | || |
Sbjct 150202 CGACGTTTTCGGCTTCCTTGATCTAAGGAAAAATCATGGTAAGGAAGAGGTCCGTGCTCG 150143
Query 94269 AGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTC 94328
||| | |||||||| || ||| | || ||| | || ||||| || ||| | | |||
Sbjct 150142 CGACTTGTTCTACGCACTATGGATCCCCGACTTGTTCATGAAGCGTGTCCAAGAGAACGG 150083
Query 94329 CGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382
|| |||| ||| || || ||||| ||| ||| || || ||||||||| |||
Sbjct 150082 CGAATGGACTCTGTTCTGCCCCAACGAAGCTCCTGGCCTCGCCGACGTTTATGG 150029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720571783000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |