Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq164 145 9e-30
>seq164
Length=316633
Score = 145 bits (160), Expect = 9e-30
Identities = 438/672 (65%), Gaps = 6/672 (1%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
|||||| ||||| ||||| || | | | |||||| ||| || || || | || |
Sbjct 150016 CTCAAACTCATCACCATAAACGTCGGCGAGGCCAGGAGCTTCGTTGGGGCAGAACAGAGT 150075
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| || | | | || || | |||| || | || || ||||| || || ||
Sbjct 150076 CCATTCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGGATCCATAGTGCGTAGAA 150135
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
|| || | || | | ||||| || ||| ||| | | || ||||| ||| | |
Sbjct 150136 CAAGTCGCGAGCACGGACCTCTTCCTTACCATGATTTTTCCTTAGATCAAGGAAGCCGAA 150195
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
| || || |||||||| || | ||| || || | |||| || || ||||| || ||
Sbjct 150196 AACGTCGGCGTGCCATGGCTCGAGATAGATGGCGAAGGCACCCGGACGCTTATTCCCACC 150255
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
||||| | |||| ||||| ||||| || || | | ||| |||| | |||||| ||
Sbjct 150256 CTGATCGACGTATCGTGCAGTGTTGTTGTAGACGCGGAGCATGGGGATGAGACCATTGGA 150315
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATA--TTACTAATTGAAATA 48482
||||||||||||| |||||| ||| |||| | ||| | | ||| | |
Sbjct 150316 GGTACCATTGGTTCCGCCAATATAGGAGCCAGTAGCGCGGATACGATGCACATT--CAGA 150373
Query 48483 CCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCT 48542
|| ||||| || || | || || || | ||||| || ||||| ||||| || |||
Sbjct 150374 CCAATACCGCCAGCAGTCTTGGAAATCATGGCACAAGTCTTCAGGGTGTCATAGATACCT 150433
Query 48543 TCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGAC-AAGT 48601
|| || |||||||| | || | | || || ||| |||||||| || |||| ||
Sbjct 150434 TCAATGCTATCATCCTTGATGTCGATGAGGAAGCAAGAGGACATTTGTGG-TGACGGGGT 150492
Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661
|||| || || | || || || ||||| | || |||| | ||| | | |||||
Sbjct 150493 GCCTGCGTTGAAGAGGGTCGGCGAGGCATGTGTGAAGTATTTGTTTGACATGTAGTTATA 150552
Query 48662 TGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACAT 48721
||| || || | || || || || || || |||| || ||||||||| | |||
Sbjct 150553 TGTCTCGATCGCGGACTCAATGTCTTCGCCGTGAATGCCTACAGCTACACGCATAAGCAT 150612
Query 48722 ATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGT 48781
| |||||| | |||| ||| ||| ||| ||| | | || |||||| ||| | ||
Sbjct 150613 GTGTTGAGGACGTTCAGCAACCTTGCCATTGATTCTGAGCAGGTATGATCGTTCAAGGGT 150672
Query 48782 TTTAAAACCAAA 48793
|| ||||| ||
Sbjct 150673 CTTGAAACCGAA 150684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562105813797000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |