Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq193 93.3 3e-13 >seq193 Length=432486 Score = 93.3 bits (102), Expect = 3e-13 Identities = 113/153 (74%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 550385 CAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||||| |||| | | || || | || || || || || || || || || || ||||| Sbjct 54769 CAAGAACGTTAAGAACGCCGTTGTCACCGTCCCGGCCTACTTCAACGATTCCCAGCGTCA 54710 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||| || || |||||||| | || ||||| || || ||||| ||| | ||||| || || Sbjct 54709 AGCCACCAAGGATGCTGGTCAGATCGCTGGTCTCAACGTTCTCCGTGTGATCAACGAGCC 54650 Query 550504 TACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||||||||| || || || || || ||||| Sbjct 54649 CACTGCTGCTGCTCTCGCCTACGGTCTCGATAA 54617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029273524083250