Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq164 196 9e-45
seq244 152 1e-31
>seq164
Length=316633
Score = 196 bits (216), Expect = 9e-45
Identities = 482/720 (67%), Gaps = 27/720 (4%)
Strand=Plus/Plus
Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007
||||| |||||| || || ||||| | || ||||||||| || |||||||| | |||
Sbjct 149193 GTAAATGTTTGAGGTATATGGCTCAAAGCACTCGTTGTTTCCGAGAATCTGAGAGGTGGA 149252
Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGC 213066
|| || ||||| || || || ||||| ||| | ||| || |||| | ||| |||
Sbjct 149253 AGCCGTTGGCATAGGGGCAACAAGGAGCGAGTTTCGCACACCATGCTGAGCAATGTTGGC 149312
Query 213067 GCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGT 213126
|| | |||||||||| ||| || | |||||||||||||
Sbjct 149313 CTTCAATGAAT-CCCAGTCCCAAAGATCAGTAGGGG---------TGACGTTCCACATGT 149362
Query 213127 CAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCT 213186
| | |||||||| |||| | |||||| || | ||| | || || || ||| |||
Sbjct 149363 CGTATTGCAAGATACCTTGGGACACGGGAGAACCTTCGTAGGTGGCATAAGGACCAAGCT 149422
Query 213187 CCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCC 213246
|||| | | ||||||||| || |||||||| | ||| ||||||||||| ||||
Sbjct 149423 CCTTAGAAATCTCGCAGGATGCAGTGAGGGCAGCATGGTAAATGGTTTCAAAGATCTGAG 149482
Query 213247 TGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAG 213306
||||||||||| | |||||||| || |||||||| | | |||| ||||||
Sbjct 149483 TGTTGAGCTTCCTAGCCTCTGGAGAATCAAAGGGCATGCGGAGGGCAAGGAATGCATCAG 149542
Query 213307 CCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAG-CACTCC 213365
| || || ||||| |||| |||||| |||| ||| || | || | || | |||
Sbjct 149543 CGAGACCTTGGACACCGAGGCCGATAGGTCGGTGCCTGAAATT-GCTGCGGCGTGCCTCT 149601
Query 213366 TCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTG 213425
|| | |||||| || |||||||| ||||| |||||||| ||| ||| | |||
Sbjct 149602 TCGACGGGGTAGTGATTTACTTCGATGATTTTGTTTAGGTTGCGAGTGAGCACCTGAGTG 149661
Query 213426 ACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCG----TCCTGCACAAACTCAGG 213481
|| | | || | || | || || | || || | | || || | ||
Sbjct 149662 ACCTCGTGGAGCTTCTGGAAAT----CATATTCGCCACGATGATAGTCGACGAAAGCGGG 149717
Query 213482 CAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC--CTGAGAGTCTGTGTACTCCATG 213539
|| || | | ||| |||||| || || ||||| ||| ||| | |||||||| |||
Sbjct 149718 TAGAGCAAGAGAGCCCAAGTTGCATACCGCGACCTCATCTG-GAG-CGGTGTACTCAATG 149775
Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599
||||| ||||| ||||| | ||||| || |||| ||||| ||| ||| |||||
Sbjct 149776 ATCTCAGTGCAGAGGTTAGAACTGCGGATAGTTCCCAAGTTCTTCTGG-TTGCTCTTGCG 149834
Query 213600 TTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTAT 213658
| ||| | ||||||||||||||| || ||| || ||||| ||||||| | || ||
Sbjct 149835 GTTGCATGCATCCTTGTAGAGCATATATGGGTTTCCAGTCTCAGTCTGGGACTCTAGGAT 149894
>seq244
Length=165466
Score = 152 bits (168), Expect = 1e-31
Identities = 346/519 (67%), Gaps = 15/519 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| ||| ||| |||||||||||
Sbjct 56014 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCCGCCAGGGAGATGTTCTC 56073
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||| ||| ||||| |||| | ||| || | | | ||| | | |||||
Sbjct 56074 CATAAAGTCAAAGGGATTGGTAGCGTTGTAGAACTTGTTGTTGCCGAGGGCTAAGAGCAG 56133
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| || || || |||| ||||| | ||||||||||| |||||||| | || |
Sbjct 56134 ACGGTCGGCAACAAACTCAATGTACTGGCACATGAGGGTGGCATTCATGCCGAGCAGTGC 56193
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
||||||| || | | ||||||| ||| || ||||| || | || |
Sbjct 56194 GCATGGCAAAGACTCGGACAAGAACTCCTGCTCAATGGTGACGGCCTCAGTGATGATGTC 56253
Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC------AGGTGCTTGGCATAGAGCATGCA 48132
| || | ||| | ||| |||| ||||| || | |||| | |||
Sbjct 56254 TTGCAC-----AGCCTGCTTGCTTGG-GCGCGACTTGAGGTG---GGAAAAGAGGAGGCA 56304
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
||||||||| |||||| || ||||| || ||||||| | ||||||||| ||||||
Sbjct 56305 GGCAAAGTCAGTGTGCATACCCTCGTCACGAGAGATGAGCTCATTGGAGAAGGTGAGACC 56364
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
||||||| || | || ||||||||||| || | || || | || |||||||||
Sbjct 56365 TGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGATGCAAAGGCACCGCTGAAGAAGAT 56424
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
||||| || || || || ||| | || | | || || | | |||||| || | |||
Sbjct 56425 ACCCTCAACGGCGGCAAAGGCGATAAGACGCGTGCCAAAGGTGGAGTTCTTATCCGTGAT 56484
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||| ||| |||||||| |||||||| |||||| ||
Sbjct 56485 CCATCGAAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 56523
Score = 93.3 bits (102), Expect = 8e-14
Identities = 174/255 (68%), Gaps = 3/255 (1%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||| |||||||||| | ||||| || |||||| || ||||||||| | |||||
Sbjct 56648 GTACGTCTCAGAGTGGATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAACGCGCCTC 56707
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
|| || ||||| | ||||| ||| | || |||||| ||||| || ||||| ||
Sbjct 56708 GGGGACTTGTACTTCGCCGCTGAATCGCTCGACCAAATTCTCGTTGACAATGCCATCGGA 56767
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGC 48600
|| || |||||||||||||| || | ||| |||||||| || | | |
Sbjct 56768 TGCGGCGAAGAAGGCAAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCATTCAATCGCTT 56827
Query 48601 ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660
|||||| | || | |||||| || || | || || |||||||||| || ||
Sbjct 56828 GTTCCAGTCGTGGAGATCTTTGGAGAGATCAATCTCCTCAGCAGTCCAGAAAGAAGCTTC 56887
Query 48661 TGCTTTTTTGTACAT 48675
|| || ||||||||
Sbjct 56888 AGCCTTCTTGTACAT 56902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931527851232000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |