Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 8e-14 >seq9 Length=355999 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || |||||||| ||||| | | ||||||||||||||| || || || |||||||| || Sbjct 44801 TGCTTACCAGCGAAAATGAGACGCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGATC 44860 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || ||| || || || || ||||| || || || || ||||| || || || ||| Sbjct 44861 TTCGATTTGACGTTGTCGATGGTGTCTGAAGACTCAACCTCGAGAGTGATTGTCTTGCCA 44920 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | || |||| ||| |||||||| Sbjct 44921 GTCAGAGTCTTAACGAAAATCTGCAT 44946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905131191465000